Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1241 ATGTCGTTCAGCGGAACCCAACAGAAATGCAAGTCTTGTGATAAAACCGTTCACTTTGTCGACGCCATATCCGCGGATGGCGTCATTTATCACAAGACCTGCTTCAGATGCAGTCACTGCAACGGCCTCCTTGTGGTGACTGTGGAAGGAGCATTCTATCACAAATCATGCTTTAGGTGCGCTCACGGAGGGTGCTTCATAAGCCCCTCGAACTATGCCGCAATAGACGGGTTTCTGTACTGCAAGATCCATTTCGCGCAGTTGTTCAAGGAGAGAGGCAGCTATAACCACATGAGGTCGACTTCCATGAAAAAAAACGCTGAGAAGGCCGATTCTGAATCCAATCCTGCATCCGACTGTGAGTCTAATGCTAAGGAAGAAGAAACGCCTGAGCAAGAAGAGGCGCCACAGGAAGAAGTGCAAGTTGCAGCCGAATAG 438 0.4932 MSFSGTQQKCKSCDKTVHFVDAISADGVIYHKTCFRCSHCNGLLVVTVEGAFYHKSCFRCAHGGCFISPSNYAAIDGFLYCKIHFAQLFKERGSYNHMRSTSMKKNAEKADSESNPASDCESNAKEEETPEQEEAPQEEVQVAAE 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1241 145 SMART lim_4 9 57 IPR001781 -
Bisa01g1241 145 MobiDBLite consensus disorder prediction 100 145 - -
Bisa01g1241 145 Pfam LIM domain 10 44 IPR001781 -
Bisa01g1241 145 Pfam LIM domain 45 88 IPR001781 -
Bisa01g1241 145 Gene3D Cysteine Rich Protein 2 44 - -
Bisa01g1241 145 MobiDBLite consensus disorder prediction 102 125 - -
Bisa01g1241 145 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 59 98 - -
Bisa01g1241 145 ProSiteProfiles LIM domain profile. 8 91 IPR001781 -
Bisa01g1241 145 PANTHER OS06G0237300 PROTEIN 46 136 - -
Bisa01g1241 145 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 3 35 - -
Bisa01g1241 145 Gene3D Cysteine Rich Protein 45 144 - -
Bisa01g1241 145 ProSitePatterns LIM zinc-binding domain signature. 10 44 IPR001781 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1241 Bisa-ChrBisa01 20801694 20803961 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LIM Bisa01g1241 LIM 1.5e-07 CL0167