Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1230 ATGGTAGATGTTAATATGGAGCTGGAGGAGTTCCCTTTTGATTCACCTGAACGGGATGTACTCCCCTCATGCCTTTCTCCCCTTAATTCAGGGAGAAGAAAAGGTCAAGCTAGACGCTCAACGAAGGGATGCTGGAAAGACGAAGAGGACAAGCTTTTGATTGAGGCAGTCGAGAAGCACAACGGAAGGAACTGGAAAAAAATAGGTGCATGTGCCAGTATCATTCTTGCTGCGTACATCCCTGGAAGAACTGATGTTCAATGCTTGCATCGCTGGCAAAAGGTTTTAAATCCCGAACTAGTAAAGGGATCGTGGACAAAGGAGGAGGATGATTGTATCATTGAGCTAGTTAGAAAGCATGGTTGTAAGAGATGGTCTGTTATTGCAAAATCCTTACCGGGCCGTATTGGGAAGCAATGCCGAGAGAGATGGCACAATCACCTCGATCCAGCTATAAAGAAAGATGCATGGACAGAAGAGGAGGAATCAATACTTGCTTACTATCACCAAATATACGGTAGTAAGTGGGCAGAGATTGCAAGGTTTCTTCCTGGAAGGACTGACAACGCTATTAAAAATCATTGGAACTGCTCAATGAAGAAGTTAGATGCATCTTCACCGGGACTGACATCGCATATGTTGGTCAAAGCAGAGGGTCAGAGCCTTAATCAAATAGTTTCACCCAAGCAGAGCTACAGGTTGAAGCACAATGTTGATACCTCGGTGGCAGAACTGATTCGTCAAAGTGCTTTAGGAGAGAAATTTTCCTCAGAAAAAAGTGGCTCTAAGAGAAGTCTTGGGATCACAACAGTAGGTGAGAGCAGATTGATCAACTCACCAAATGGGATGAACTTCATTGATGGAGTCGTCACATGTTGGAAAGACAACGCCAGCACAAACAGATCCATGGCATCTGATTTTGATGTTTCTCTGGACAGCCTTACTACTGAATTAGATCGTGTACCTCTTGAAGTTGCCACCTCTGTTACAAATGAGCTGTCTAAATCTCCCAAGCGGCTTAGGTTCTCTTCTTCAGATACGAAGTTTGTGGTGGATGGAAAATCATTCAGTCCTCTTTTGAGTCACCCAAGATTGGCCAATGATGAGGAGGAAGGTCAAGTTGGAAGCAAAAGTAGAATCAACAGTATGCCAAGTCATAATTACTATCCCACAGAATCTGTTAAATTCCCAAGTAATGAAAACCACATCGATTATCATACTCCCCCAAAGTCTGCACTCAGAAATATCACAGGCGACAGTAGCCCCGAATCTGTCCTGAGAAGCTTAGCTATGACCTTTGAGAATATTCCTTCCATCATTAGGAAGAGAACTGCCAGAAAAACTCCTGGTCCTCACAATTCTGACCCCGCCCGTACTCCTTTGCAGATGATCTTCTCTTCACCTGAGAATGAACATTCAAATAGCTTAGACAATTTTAAGCCGAAGCAGGGCGGTTTTATATCGTTCACTCATAAAACGAAAACTTCTACAATCTCTAAATCTCTTCAAGAGATGACTGGACTACCGATAGTGGACAAGGCAGAGAAGCAGAAGCTTATCTATACCTCGTCGGATTCTTTAGAATGGTGA 1590 0.4346 MVDVNMELEEFPFDSPERDVLPSCLSPLNSGRRKGQARRSTKGCWKDEEDKLLIEAVEKHNGRNWKKIGACASIILAAYIPGRTDVQCLHRWQKVLNPELVKGSWTKEEDDCIIELVRKHGCKRWSVIAKSLPGRIGKQCRERWHNHLDPAIKKDAWTEEEESILAYYHQIYGSKWAEIARFLPGRTDNAIKNHWNCSMKKLDASSPGLTSHMLVKAEGQSLNQIVSPKQSYRLKHNVDTSVAELIRQSALGEKFSSEKSGSKRSLGITTVGESRLINSPNGMNFIDGVVTCWKDNASTNRSMASDFDVSLDSLTTELDRVPLEVATSVTNELSKSPKRLRFSSSDTKFVVDGKSFSPLLSHPRLANDEEEGQVGSKSRINSMPSHNYYPTESVKFPSNENHIDYHTPPKSALRNITGDSSPESVLRSLAMTFENIPSIIRKRTARKTPGPHNSDPARTPLQMIFSSPENEHSNSLDNFKPKQGGFISFTHKTKTSTISKSLQEMTGLPIVDKAEKQKLIYTSSDSLEW 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1230 529 ProSiteProfiles Myb-like domain profile. 149 199 IPR001005 -
Bisa01g1230 529 ProSiteProfiles Myb-like domain profile. 37 96 IPR001005 -
Bisa01g1230 529 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 97 152 IPR017930 -
Bisa01g1230 529 FunFam Transcriptional activator Myb isoform A 102 154 - -
Bisa01g1230 529 PANTHER MYB PROTEIN-RELATED 42 135 - -
Bisa01g1230 529 CDD SANT 104 148 IPR001005 -
Bisa01g1230 529 Pfam Myb-like DNA-binding domain 154 196 IPR001005 -
Bisa01g1230 529 Pfam Myb-like DNA-binding domain 42 96 IPR001005 -
Bisa01g1230 529 Pfam Myb-like DNA-binding domain 102 148 IPR001005 -
Bisa01g1230 529 CDD SANT 45 96 IPR001005 -
Bisa01g1230 529 ProSiteProfiles Myb-like domain profile. 97 148 IPR001005 -
Bisa01g1230 529 FunFam Transcriptional activator Myb isoform A 41 101 - -
Bisa01g1230 529 SUPERFAMILY Homeodomain-like 40 110 IPR009057 -
Bisa01g1230 529 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 153 203 IPR017930 -
Bisa01g1230 529 Gene3D - 102 153 - -
Bisa01g1230 529 Gene3D - 156 202 - -
Bisa01g1230 529 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 42 96 IPR017930 -
Bisa01g1230 529 MobiDBLite consensus disorder prediction 368 388 - -
Bisa01g1230 529 SUPERFAMILY Homeodomain-like 99 195 IPR009057 -
Bisa01g1230 529 SMART sant 153 201 IPR001005 -
Bisa01g1230 529 SMART sant 41 98 IPR001005 -
Bisa01g1230 529 SMART sant 101 150 IPR001005 -
Bisa01g1230 529 Gene3D - 41 101 - -
Bisa01g1230 529 CDD SANT 156 196 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1230 Bisa-ChrBisa01 20609066 20613685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1230 32 201 MYB Transcription Factor Family AT5G02320 67.647 5.03e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g1230 Myb_DNA-binding 3.2e-13 CL0123