Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1228 ATGGAAACAAAGATCCAAAGCGAAGCCTTATTCGTGACGCGAAGCAGCAACTCAATCGAAGCTCTCGCCATTACAACTGCCAACAAAACAAGTCACGAACTTTCTAGCGTCATCTTCTTATCCATCCCGCTCTCGAAATGCGGGGCCCACCGTATTGGTCTTTCCATATTCCAAGCTCTCATTTCCTTCTCCTTCTGGAACTTACGAATGCTTTTTTCTCTGTCTTATAGATATCATTTACTCTCCCCTAAGAAACTTCTAGAAACAACAAAAGCTTACCACCCCGCCCACTGCTCCTCTCTTCCCCGCCTTAGCTCCATACAGGCGTTGCTCTTGGTTTCTTGTCTTTCTGTTTGGTCGATGAGAAAAGACAACTGCAGAATGAATAATCCGTCCATCTCCGTCAAGAGCGCTAGGAGGATGAGCTCCTCCAGATCTGGAAGCCAAGTCCATGTGGCGCCGTCCGAGACTGGAGAATTGGCATCATCAGACTCGCAGTCGCAGAGATCTATTCCGACGCCGTTTCTGACTAAAACCTACCAGCTCGTGGATGATCCCTCTGTAGATGACCTAATCTCCTGGAACGAAGATGGGACAAGTTTCATAGTTTGGAAACCAGCTGAATTCGCTCGAGATTTACTGCCTAAGTATTTCAAACACAATAATTTCTCCAGTTTCGTCCGTCAGCTTAACACCTATGGGTTTCGGAAGGTTGTCCCAGATCATTGGGAATTTGCTAATGACAGCTTTCGGAGAGGTGAAAGAGGTCTTCTACGAGACATACATCGGCGGAAGATCACATTACCGTCGACAGCGACGGCGAATACAGTGACGGTGGCTTCAGCAGTCAAAGCGGTGTCTCCAGCCAACTCCGGCGACGAACAGGTAATCTCCTCAAACTCTTCTCCAATTGCTGGAAGTAATAATACAGTGCACCGCTCCACAAGCTGCACTACCACGCCGGAGCTCTTAGAGGAGAACGAAAGGCTTAGGAAAGAGAACATGCAAATGAGTTACGAATTAAGTCAACTGAAAGGATTGTGTAATAAAATACTGGCTCTGATGACGAATTATGCTTCTATCCAAGTAGAGAGCTCTTCTAGTACTGTGCCCCAAGGACAAGCCATGGAGCTCTTACCTGTGAAGCAAGTTCTGTCGTGTGAAGAAGAGGAGGTCCCAAAGTTGTTTGGGGTTTCAATTGGGATTAAACGATGTAGGAGGGAAGTTGAGGAAGCTGCAAAAGAAGAAGCAAATCAAACGCAGTCCAGCTCGCAAGAACCTGATGGTGGTGGGTCTGACATGAAATCAGAGCCGTTGGATGGCAATCAATACGATGTTGTGGCGCCTTCGTGGTTTGAGCTTGGGAAATAA 1371 0.4712 METKIQSEALFVTRSSNSIEALAITTANKTSHELSSVIFLSIPLSKCGAHRIGLSIFQALISFSFWNLRMLFSLSYRYHLLSPKKLLETTKAYHPAHCSSLPRLSSIQALLLVSCLSVWSMRKDNCRMNNPSISVKSARRMSSSRSGSQVHVAPSETGELASSDSQSQRSIPTPFLTKTYQLVDDPSVDDLISWNEDGTSFIVWKPAEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDHWEFANDSFRRGERGLLRDIHRRKITLPSTATANTVTVASAVKAVSPANSGDEQVISSNSSPIAGSNNTVHRSTSCTTTPELLEENERLRKENMQMSYELSQLKGLCNKILALMTNYASIQVESSSSTVPQGQAMELLPVKQVLSCEEEEVPKLFGVSIGIKRCRREVEEAAKEEANQTQSSSQEPDGGGSDMKSEPLDGNQYDVVAPSWFELGK 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1228 456 Gene3D - 167 265 IPR036388 -
Bisa01g1228 456 FunFam Heat stress transcription factor B-4 167 265 - -
Bisa01g1228 456 ProSitePatterns HSF-type DNA-binding domain signature. 214 238 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1228 456 SUPERFAMILY "Winged helix" DNA-binding domain 172 264 IPR036390 -
Bisa01g1228 456 PRINTS Heat shock factor (HSF) domain signature 213 225 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1228 456 PRINTS Heat shock factor (HSF) domain signature 175 198 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1228 456 PRINTS Heat shock factor (HSF) domain signature 226 238 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1228 456 MobiDBLite consensus disorder prediction 292 315 - -
Bisa01g1228 456 MobiDBLite consensus disorder prediction 416 430 - -
Bisa01g1228 456 Coils Coil 402 422 - -
Bisa01g1228 456 Pfam HSF-type DNA-binding 175 264 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bisa01g1228 456 MobiDBLite consensus disorder prediction 135 171 - -
Bisa01g1228 456 MobiDBLite consensus disorder prediction 410 456 - -
Bisa01g1228 456 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 164 423 IPR027725 -
Bisa01g1228 456 SMART hsfneu3 171 264 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1228 Bisa-ChrBisa01 20601999 20603628 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1228 167 456 HSF AT4G11660 51.070 5.89e-98 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bisa01g1228 HSF_DNA-bind 4e-32 CL0123