LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g1219	ATGTTGGCTGGGTGTTCTAGTTCTACATTGTTGTCACCAAGGCATAGATTGAGGAGTGAAGCATCTGCACAGTTCCAAGCAAGCCATTTCCAGTTGCCTTCGATGAGCACGCAGAGACTGGACTTGCCATGTAGCTTCCCGCGCAAAGACAACAACACCTCGCGTTCGCAGCCCTTGAGGCCCGTGGGCCTTTCCGTGGAGAAGAAGCCAACCGAGCCCAAGAACAAGCCCACCACATGTTCTCTCAAGCAGAGCATCCGACTTCCGCCATTGGCAACGACGGCTCATGCCACGAATGCTCCAAAGGATGAATTTTGGGAGAGGGGCAAGAGCTTGAAGAGGCTTGCAGAGCAGGATGAGTCCTTCACCAACAGAGCCAAGAGGACGAAGGGAATCATCAGTAACATTGAAAATTCCCATGACGTTCAAGAAATCCAAACTGCTGGGAACTTTTGGTTCAATAGCCCTTCGGTTCCTTTCTCTCTGACTTGTTCAGGGGAAGAAGAAGAACAAAGGGTGTGTTTTGTGCCTTCTGAAGTTGTATCTGCACCTTGGGTGGATTCCATTGTTACTAAGATCACAGATTCAGGTGAGACAGGAGTTGAAGGAAGCAATCTGCCAGCAAAGGAAGCATCAGTGTCCAACACTTCATCAGAAAGTAAAAGCTTGAGCCTGAGGTTGAACGAGAATGACTCTGAACACGAAGTGGGTAACGGAAGAAGATTAGGGAATCCTTATCACCACGACGGAACAGAGGTAGAAACAGGGGATGACGACAACCAAGAGGAGCATCGAGGATTTGAGCTTGTAAGTTTACTTGCAGCTTGTGTTGACGCTATTGGGTCGAGGAATGTTGCAGCGGTGAACTGTTTCATAGCGAAGTTGGGTGATCTTGCGTCTCCAAGGGGAAGAACATCTCTGAGTCGTGTTTGTGCTTATTTCACCGAAGCTTTAGCTGTTCGTGTCACCAGAATTTGGCCTCACATTTTTCACATCACTACGCCTCGGGAACTAGATAGGGTGGAAGATGAAACAGGCACTGCATTAAGGCTTCTAAACCAGGTCAGCCCAATTCCAAAGTTTCTTCATTTCACGTCAAATGAGATACTACTGAGGGCCTTTGAAGGAAAAGAGAGGGTTCACATCATAGACTTCGACATCAAGCAAGGGCTTCAATGGCCTAGCTTGTTCCAGAGTTTAGCTTCGAGGACCAATCCTCCATCCCATGTGAGAATCACAGGTATAGGAGAGTCCAAGCAAGAGCTGAACGAAACAGGAGACAGGCTTGCTGGGTTTGCTCAAGCATTGAACCTTCCTTTTGAGTTTCACCCTGTAGTGGACAGGCTAGAAGACGTGAGGCTATGGATGCTTCATGTGAAGGAACACGAAAGTGTGGCAGTGAACTGTGTTTTCCAACTCCACAAGACGCTCTACGATGGAAGTGGAGGAGCACTGAGGGATTTTCTGGGTCTGATTCGAAGCACAAATCCATGTATAGTCCTTATGGCAGAGGAAGAGGCAGAGCACAATGGAGTTAGATTGGACACAAGGGTGTGCAATTCGCTGAAGTACTATTCTGCTCTATTTGATTCAATTGACCACTGTCTTCCGCAAGACAGTCCAATGAGGATGAAAATAGAGGAGATGTACGGGGGGGAGATAAGGAACATCATTGCTTGTGAAGGAAGGGAGAGGGTTGAGAGGCACGTGGGTTTTGAGAAATGGAGGAAGATGATGGAACAAGGTGGGTTCAGAAACATGGGAATCAGCGAAAGGGAAATGCGACAGAGTCAAATGCTGCTGAAGATGTATGCTTGCGAGAATTACAATGTGAAGAAGAAGGAGGAAGAAGGAGCAGAAGCAATCAGTTTGGGTTGGCTAGAGCAGCCTCTGTACACAGTGTCAGCATGGGCACCAGTTGATGCTGCAGCAGGAAGCTCATCCTCCTATTCTCAGCCATCTTGA	1965	0.4794	MLAGCSSSTLLSPRHRLRSEASAQFQASHFQLPSMSTQRLDLPCSFPRKDNNTSRSQPLRPVGLSVEKKPTEPKNKPTTCSLKQSIRLPPLATTAHATNAPKDEFWERGKSLKRLAEQDESFTNRAKRTKGIISNIENSHDVQEIQTAGNFWFNSPSVPFSLTCSGEEEEQRVCFVPSEVVSAPWVDSIVTKITDSGETGVEGSNLPAKEASVSNTSSESKSLSLRLNENDSEHEVGNGRRLGNPYHHDGTEVETGDDDNQEEHRGFELVSLLAACVDAIGSRNVAAVNCFIAKLGDLASPRGRTSLSRVCAYFTEALAVRVTRIWPHIFHITTPRELDRVEDETGTALRLLNQVSPIPKFLHFTSNEILLRAFEGKERVHIIDFDIKQGLQWPSLFQSLASRTNPPSHVRITGIGESKQELNETGDRLAGFAQALNLPFEFHPVVDRLEDVRLWMLHVKEHESVAVNCVFQLHKTLYDGSGGALRDFLGLIRSTNPCIVLMAEEEAEHNGVRLDTRVCNSLKYYSALFDSIDHCLPQDSPMRMKIEEMYGGEIRNIIACEGRERVERHVGFEKWRKMMEQGGFRNMGISEREMRQSQMLLKMYACENYNVKKKEEEGAEAISLGWLEQPLYTVSAWAPVDAAAGSSSSYSQPS	654

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g1219	654	ProSiteProfiles	GRAS family profile.	260	638	IPR005202	-
	Bisa01g1219	654	PANTHER	OSJNBA0084A10.13 PROTEIN-RELATED	214	634	IPR005202	-
	Bisa01g1219	654	MobiDBLite	consensus disorder prediction	43	80	-	-
	Bisa01g1219	654	Pfam	GRAS domain family	269	637	IPR005202	-
	Bisa01g1219	654	MobiDBLite	consensus disorder prediction	196	260	-	-
	Bisa01g1219	654	MobiDBLite	consensus disorder prediction	226	260	-	-
	Bisa01g1219	654	MobiDBLite	consensus disorder prediction	208	225	-	-
	Bisa01g1219	654	MobiDBLite	consensus disorder prediction	43	60	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g1219	Bisa-ChrBisa01	20363042	20365084	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g1219	1	637	GRAS Transcription Factor Family	AT1G63100	59.675	0.0	733

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	GRAS	Bisa01g1219		GRAS	4.9e-128	CL0063