Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1215 ATGGCGTCGTCATCGACATCCACGTGTTCGAAGAGGCACCCGGTGTACCGGGGAATCCGGATCCGGGGAGGGAAGTGGGTGTCGGAGATCCGGGAGCCACGTAAGGCGTCGCGGATATGGCTGGGGACGTTCGCCACGGCGGAGATGGCGGCGGCAGCGTATGACGTGGCCACTCTGGCACTGAAAGGCAAGGACGCCGTTCTCAACTTGCCGGACTCCGTGGGGAGGTACCCGGTGCCTCTGTCCACCTCTCCTTCTCACATTCGAAGTGCTGCCTCTGCTGCTGCTTCGCTCTTCAGCGCTGAATCTAATAATTGCAATTCCAATTCTGATTGTACCTATAATGCTGCAGGTTCTGGTATTGAAGCTGATAATTACAATGATGTGTCAGTGTCATCGGGGTGGTGCGAGACAGGTGAATTTGTGGACGAGGATGCCATTTTCGGGATGCCTGGTTTGCTGTTGGACATGGCAGAGGGAATGCTTCTGTCGCCTCCCAGAATAGCCTCTCCACCATCGGAGACCAACTCCCCTGTTGATTGCCTATGGAGCTACTTCTGA 561 0.5597 MASSSTSTCSKRHPVYRGIRIRGGKWVSEIREPRKASRIWLGTFATAEMAAAAYDVATLALKGKDAVLNLPDSVGRYPVPLSTSPSHIRSAASAAASLFSAESNNCNSNSDCTYNAAGSGIEADNYNDVSVSSGWCETGEFVDEDAIFGMPGLLLDMAEGMLLSPPRIASPPSETNSPVDCLWSYF 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1215 186 SMART rav1_2 15 77 IPR001471 GO:0003700|GO:0006355
Bisa01g1215 186 ProSiteProfiles AP2/ERF domain profile. 15 71 IPR001471 GO:0003700|GO:0006355
Bisa01g1215 186 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 10 184 IPR045277 GO:0003700
Bisa01g1215 186 SUPERFAMILY DNA-binding domain 15 73 IPR016177 GO:0003677
Bisa01g1215 186 Pfam AP2 domain 14 63 IPR001471 GO:0003700|GO:0006355
Bisa01g1215 186 CDD AP2 16 73 IPR001471 GO:0003700|GO:0006355
Bisa01g1215 186 Gene3D AP2/ERF domain 15 72 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1215 Bisa-ChrBisa01 20277960 20278520 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1215 2 185 AP2-EREBP Transcription Factor Family AT5G52020 47.090 1.86e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g1215 AP2 1.9e-09 CL0081