Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1214 ATGGACTTTTCCAGATCAGAAGCACTAGTTTTCGATGCGTCTTCATCCTCGGAAGCGAGCTCCTGCGAAGAGGTCATATTGGCTTCGGAGCGGCCCAAGAAGCGAGCGGGTCGGCGGATTTTCAAGGAGACCAGGCATCCGGTGTATCGAGGGGTGCGACGCCGGAATAACAACAAGTGGGTCTGCGAGGTGCGCGTGCCCAATGCTAAGTCCAGGATCTGGCTTGGGACTTACTCCACGCCGGAGATGGCAGCGCGGGCTCATGACGTGGCCGCTCTGGCTCTTCGTGGAAAGTCGGCTTGCGTTAATTTTGCTGACTCTGCTTGGCGCTTACCTCTGCCTGCGTCTACCGATGCAAACGACATCAGGAGAGCGGCTGCTCAGGCGGCTGAGGAATTCGGCAAGGTTACTGATGATTATGAAGTTTGCAGTAGCCCAAACGTCAACGAAGATTCCAAGAATATACGAGACTACGAGTCCATGTCAGTGTCGGATTTTGATCATCAGCTTCACGATTTGATGTTGAGCATGGCGGATGAGCCTCTTCGATCTCCTCCTCCTTTTGCACATCATGGCAGCAGGGGATGGACTGCTGACGTGGAGTTTGATGCCGAGGTGTCATTGTGGCAGTTTTAGTGCAAGGCCACAGGTGCAAGGCCGATTGGGATCTGTGATAGTGAAAAGCATTGGGAAAATTTATGGAGTTCCACACTTTGTGCTGGCGTCGGCGCCAGAAGGGCCTTCAGGTTTTTTTCCTCACGTCGATTCGAATATGAGTGTCTTCATATCTCAGCCCAATTGCTCACCCAAGCCATTATTGCTCTGGTTCTCACGGTCTCCCTCATCTCCCACCCCTCTGTCCCATCTTCTCCTCGTCACTTTGATCAAAGCTTGGCTACTACTCTTCATTCTCCGACCACCCGAGTAGAAGCTCGTGATCTCCGACACTGA 951 0.5289 MDFSRSEALVFDASSSSEASSCEEVILASERPKKRAGRRIFKETRHPVYRGVRRRNNNKWVCEVRVPNAKSRIWLGTYSTPEMAARAHDVAALALRGKSACVNFADSAWRLPLPASTDANDIRRAAAQAAEEFGKVTDDYEVCSSPNVNEDSKNIRDYESMSVSDFDHQLHDLMLSMADEPLRSPPPFAHHGSRGWTADVEFDAEVSLWQFXCKATGARPIGICDSEKHWENLWSSTLCAGVGARRAFRFFSSRRFEYECLHISAQLLTQAIIALVLTVSLISHPSVPSSPRHFDQSLATTLHSPTTRVEARDLRH 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1214 316 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
Bisa01g1214 316 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Bisa01g1214 316 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Bisa01g1214 316 Pfam AP2 domain 47 97 IPR001471 GO:0003700|GO:0006355
Bisa01g1214 316 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 14 210 IPR045277 GO:0003700
Bisa01g1214 316 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Bisa01g1214 316 CDD AP2 49 107 IPR001471 GO:0003700|GO:0006355
Bisa01g1214 316 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Bisa01g1214 316 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Bisa01g1214 316 SUPERFAMILY DNA-binding domain 48 107 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1214 Bisa-ChrBisa01 20243211 20245308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1214 23 186 AP2-EREBP Transcription Factor Family AT1G12610 53.672 1.91e-58 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g1214 AP2 1.3e-13 CL0081