Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1208 ATGGGTAAGTTTGGTTTTGGGGAAAAGCTATCTTTCGGAGGCTCAGGCCATGGACTCGGCCAGATAGTCTTTCCATTTTCAACCACTACCAGTTCCTTAAGGTGCTTGCTTCTACATGGAAACTTAGACATACGTGTGAAAGAGGCCAGAAGCCTACCCAACTTGGATATGGTCCATCAGAAAATCGGGGATATGTTTTCCAAGTTACCTGGAAAACTTGGTCAAAAGATTGACAAGCATATGTCTAATACAATTGTCACTAGTGATCCATATGTGACGGTATCTGTTGCTGGTGCTGTAATTGCTAGAACATTTGTAATCAAGAACGATGAGAACCCTGTTTGGATGCAGCATTTCAATATTCCCGTGGCACATTATGCTGCAGAAGTACACTTTGTTGTAAAAGACAGAGACATTGTGGGATCACAGATCATAGGAGCTGTGGGAATACCGGTGGAACAATTATATGAAGGTAAAATAATTGAAGGATCCTTTCCTATCCTTAATTCTAGTGGAAAACCCTGCAAAGCTGGGGCAGTATTGAGTTTATCCATTCAATACATTCCTTTTGATAAGATGGTCCTTTATAGTCATGGAGTAGGGGCAGGTCCTAATTATGAAGGAGTGCCTGGTACTTACTTTCCTCGTAGGAAGGGTGGTCAAGTTAGGCTTTATCAAGATGCTCATGTTCATGAAGGAGCATCCTTGGATATAAAACGGCATGAGTTGTATTTCTCAGTAGCTGTATTCAGTTTCGTCAATGTTAAGATGTTCACCAATGGTCCTGTTGATGGCTGTCCAAGACAACCATGGCATGATTTGCACTCACAAATTGATGGTCCGGCTGCATATGACATCCTCACCAACTTTGAAGAACGTTGGTTAAGGACACTAAAATTGCAAGGACTCAAAAAGATGAAAAGTTCACATGATGATTCATTACTGAAAGTTGATAGAATCCCTGATATCCTTGGCATTGTTGATGTTACTTGCGTGAATGACGATAAACAGAATGCTTGGCATGTTCAGGTCTTCCGTTCAATTGATTCCAATTCTGTCAAAGGATTTCCCAAGAATCCTAAAGATGCGATAAAAAGGGTGGGGAAATTTCGTTCAGTGACTTTCTTGTCTGGTGCAAACAACTTAATTCCAATGGAAATTGCTCTCAAAGTAGCTACCAAAATTAAACAACATGAGAGGTTTGCAGCCTACATTGTCATTCCTATGTGGCCTGAAGGTGTTCCCACAAGTAGAGCTACTCAGCGAATTCTCTTTTGGCAAGCTCCAGATGACCAAAATGCCATAAATTCTGCTGGACCAAACACTCCTCAACCTCAGGTGCACGGATATAGAATGTCACTGTGGGTTGAACATATAGGAAGGGTGGAAGAATGTTTCAAGGAGCCAGAGAGTGTTGAATGTGTGAGACGGATAAGGTACTTGAGTGAGCTTAACTGGAGGCAGTACGTAGCCGATGAGGTCCCTGAAATGGAAGGCCATTTACTAAAATACCCACTTGAGGTTGATTCAATGGGGAAGCTGAAGCCTCTTCCTGGCCATGAGACATTCCCGGATGTTGGTGGCAACGTTAAGGGCACTTTTACACTCATTCAAGAAAATCTCACCATTTGA 1632 0.4216 MGKFGFGEKLSFGGSGHGLGQIVFPFSTTTSSLRCLLLHGNLDIRVKEARSLPNLDMVHQKIGDMFSKLPGKLGQKIDKHMSNTIVTSDPYVTVSVAGAVIARTFVIKNDENPVWMQHFNIPVAHYAAEVHFVVKDRDIVGSQIIGAVGIPVEQLYEGKIIEGSFPILNSSGKPCKAGAVLSLSIQYIPFDKMVLYSHGVGAGPNYEGVPGTYFPRRKGGQVRLYQDAHVHEGASLDIKRHELYFSVAVFSFVNVKMFTNGPVDGCPRQPWHDLHSQIDGPAAYDILTNFEERWLRTLKLQGLKKMKSSHDDSLLKVDRIPDILGIVDVTCVNDDKQNAWHVQVFRSIDSNSVKGFPKNPKDAIKRVGKFRSVTFLSGANNLIPMEIALKVATKIKQHERFAAYIVIPMWPEGVPTSRATQRILFWQAPDDQNAINSAGPNTPQPQVHGYRMSLWVEHIGRVEECFKEPESVECVRRIRYLSELNWRQYVADEVPEMEGHLLKYPLEVDSMGKLKPLPGHETFPDVGGNVKGTFTLIQENLTI 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1208 543 CDD C2_plant_PLD 36 188 - -
Bisa01g1208 543 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 190 IPR035892 -
Bisa01g1208 543 PANTHER PHOSPHOLIPASE D 444 532 IPR015679 -
Bisa01g1208 543 ProSiteProfiles C2 domain profile. 18 165 IPR000008 -
Bisa01g1208 543 Gene3D C2 domain 24 188 IPR035892 -
Bisa01g1208 543 Pfam Phospholipase D C terminal 463 533 IPR024632 -
Bisa01g1208 543 Gene3D Endonuclease Chain A 235 318 - -
Bisa01g1208 543 Pfam C2 domain 40 167 IPR000008 -
Bisa01g1208 543 SMART C2_3c 41 164 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1208 Bisa-ChrBisa01 20161781 20166506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1208 443 543 Phospholipase D Gene Family (Wang group) AT2G42010 62.376 5.47e-40 154