Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1207 ATGGCCAAGTTTGGTTTTGGTGAAAAGCTATCTTTCGGAGGCTCAAGCCATGGACTCGGCCAGCTTGTTCTTCCATTTTCAACCACTACGAATTCCTTAAGTTGCTTGCTTCTACATGGAAACTTAGACATATGTGTGAAAGAGGCCAGAAGCCTACCCAACTTGGATATGGTCCATCAGAAAATTGGGGATATGTTTTCCAAGTTACCTGGAAAACTTGGTCAAAAGATTGACAAGCATATATCTAATACAATTGTCACTAGTGATCCATATGTGACGGTATCTGTTGCTGGTGCTGTAATTGCCAGAACATTTGTAATCGAGAACGATGAGAACCCTGTTTGGATGCAGCATTTCAATGTTCCCGTGGCACATTATGCTGCAGAAGTACACTTTGTTGTAAAAGACAGCGACATTGTGGGATCACAGATGATAGGTGCTGTGGGAATTCCAGTGGAACAATTATATGAAGGTAAAATAATTGAAGGATCCTTTCCTATCCTTAATTCTAGTGGAAAACCCTGCAAAGCTGGGACAGTCTTGAGTTTATCTATTCAATACATTCCTTTTGATAAGATGGTCCTTTATAGTCATGGAGTAGGGGCGGGTCCTAATTATGAAGGAGTGCCTGGTACTTACTTTCCTCTTAGGAAGGGTGGTCAAGTTAGGCTTTATCAAGATGCTCATGTTCATGAAGGTTGCCTTCCTCCCAAATTGAAGATGGAAGGTGACGTGAGTTATGAGCATGACAGTTGTTGGCGTGACATCTTTGATGCAATAAGTCAGGCTCGTCGATTAATATACATTGTGGGATGGTCTGTGTACCACAATGTTAGATTGGTTCGTGATACTAATGATGCAAAAGCGTGCACCTTGGGTGAGCTTCTAAAAATCAAATCGCAGGAAGGTGTGAGAGTGCTGCTACTTGTGTGGGATGATCCTACTTCTAGGAGCATCCTTGGATATAAAACGGATGGACTTATGAGCACTCATGACGAGGAGACTCGCCATTTTTTCAAGAACTCTTCTGTACGAGTTCTACTTTGCCCTCGATCAGGTGGAAAGGGACATAGCTGGGTCAAAGAGCAGGAAGCCGGAACCATCTATACTCATCATCAGAAAACAGTCATTGTGGATGCTGATGCAGGTCAGAATAAAAGAAAGATTATAGCTTTCATTGGAGGTCTTGATTTATGCGATGGCCGATATGATACACCAGAACATTTTCTCTTCAAGACTTTGCAGACAACACACACAGATGACTACCATAACCCTAACTTTGTGGGTCCTGTTGATGGCTGTCCAAGACAACCATGGCATGATTTGCACTCACGAATTGATGGTCCGGCTGCGTATGACATCCTCACCAACTTTGAAGAACGTTGGTTAAGGGCAATAAAATTGCAAGGACTTGAAAAGGTGAAAAGTTCACATGATGATTCATTACTGAAAGTTGATAGAATCCCTGATATCCTTGGCATTGCTGATGTTACTTGCATGAATGACGATAAACCGAATGCTTGGCATGTCCAGGTCTTTCGTTCAATTGATTCCAATTCTGTCAAAGGATTTCCCAAGAATCCTAAAGATGCTATAAAAAGGGTGGGGACATTTCGGCCAGTGACTTTCTTGTCTAACTTGGTTTGCGGAAAGAATGTAATGATAGACATGAGCATACACTCTGCATATGTTAAGGCAATCCGAGCTGCCCAAAAGTTCATATATATTGAGAACCAATACTTTCTTGGCTCGTCATATAATTGGGATTCTCATAAGAACATAGGTGCAAACAACTTAATTCCAATGGAAATTGCTCTCAAAGTAGCTACCAAAATCAAACAACATGAGAGGTTTGCAGCCTATATTGTCATTCCTATGTGGCCTGAAGGTGTTCCTACAAGTCCAGCTACTCAGCGAATTCTCTTTTGGCAGTTTAAAACAATGCAAATGATGTACGAAACGGTTTACAAGGCCTTACAGGATGCGGGGCTTGAGAATGAGTATACACCACAGGACTACTTGAATTTCTTTTGCCTTGGCAATCGTGAGGCCCCAGATGACCAAAATGCCATAAATTCTGCTGGTCAAAACACTCCTCAACCTCAGGCACTCACTCAAAAGAACCGGCGGTTCATGATTTATGTTCATTCAAAAGGAATGATAGTGGATGACGAATATGTGGTACTGGGATCTGCAAACATCAACCAACGATCTATGGAAGGAACCAGAGACACAGAGATAGCAATGGGTGCATATCAGCCTCATCATACTTGGGCAAGCAAGCACTCTAGACCTTGTGGACAGGTGCACGGATATAGAATGTCGCTGTGGGGCGAACATATAGGAAGCGTGGAAGAATGTTTCAAGGAGCCGGAGAGTGTTGAATGTGTGAGACGGGTAAGGTACTTGAGTGAGCTTAACTGGAGGCAGTACGTAGCCGATGAGGTCACTGAAATGGAAGGCCATTTGCTGAAGTACCCACTTGAGGTTGATTCATTGGGGAAGGTGAAGCCTCTTCCTGGCCATGAGACATTCCCAGATGTTGGTGGCAACATTAAGGGCACTTTCACACTCATTCAAGAAAATCTCACCATTTGA 2598 0.4288 MAKFGFGEKLSFGGSSHGLGQLVLPFSTTTNSLSCLLLHGNLDICVKEARSLPNLDMVHQKIGDMFSKLPGKLGQKIDKHISNTIVTSDPYVTVSVAGAVIARTFVIENDENPVWMQHFNVPVAHYAAEVHFVVKDSDIVGSQMIGAVGIPVEQLYEGKIIEGSFPILNSSGKPCKAGTVLSLSIQYIPFDKMVLYSHGVGAGPNYEGVPGTYFPLRKGGQVRLYQDAHVHEGCLPPKLKMEGDVSYEHDSCWRDIFDAISQARRLIYIVGWSVYHNVRLVRDTNDAKACTLGELLKIKSQEGVRVLLLVWDDPTSRSILGYKTDGLMSTHDEETRHFFKNSSVRVLLCPRSGGKGHSWVKEQEAGTIYTHHQKTVIVDADAGQNKRKIIAFIGGLDLCDGRYDTPEHFLFKTLQTTHTDDYHNPNFVGPVDGCPRQPWHDLHSRIDGPAAYDILTNFEERWLRAIKLQGLEKVKSSHDDSLLKVDRIPDILGIADVTCMNDDKPNAWHVQVFRSIDSNSVKGFPKNPKDAIKRVGTFRPVTFLSNLVCGKNVMIDMSIHSAYVKAIRAAQKFIYIENQYFLGSSYNWDSHKNIGANNLIPMEIALKVATKIKQHERFAAYIVIPMWPEGVPTSPATQRILFWQFKTMQMMYETVYKALQDAGLENEYTPQDYLNFFCLGNREAPDDQNAINSAGQNTPQPQALTQKNRRFMIYVHSKGMIVDDEYVVLGSANINQRSMEGTRDTEIAMGAYQPHHTWASKHSRPCGQVHGYRMSLWGEHIGSVEECFKEPESVECVRRVRYLSELNWRQYVADEVTEMEGHLLKYPLEVDSLGKVKPLPGHETFPDVGGNIKGTFTLIQENLTI 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1207 865 Gene3D Endonuclease Chain A 541 761 - -
Bisa01g1207 865 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Bisa01g1207 865 CDD C2_plant_PLD 36 188 - -
Bisa01g1207 865 PANTHER PHOSPHOLIPASE D 32 854 IPR015679 -
Bisa01g1207 865 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 367 402 IPR001736 GO:0003824
Bisa01g1207 865 ProSiteProfiles C2 domain profile. 20 165 IPR000008 -
Bisa01g1207 865 Pfam Phospholipase D Active site motif 368 402 IPR001736 GO:0003824
Bisa01g1207 865 Pfam Phospholipase D Active site motif 712 738 IPR001736 GO:0003824
Bisa01g1207 865 Pfam Phospholipase D C terminal 785 855 IPR024632 -
Bisa01g1207 865 Gene3D C2 domain 25 186 IPR035892 -
Bisa01g1207 865 SUPERFAMILY Phospholipase D/nuclease 209 466 - -
Bisa01g1207 865 SMART C2_3c 41 164 IPR000008 -
Bisa01g1207 865 PIRSF PLD_plant 27 865 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Bisa01g1207 865 SMART pld_4 367 402 IPR001736 GO:0003824
Bisa01g1207 865 SMART pld_4 711 738 IPR001736 GO:0003824
Bisa01g1207 865 Pfam C2 domain 40 167 IPR000008 -
Bisa01g1207 865 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 711 738 IPR001736 GO:0003824
Bisa01g1207 865 FunFam Phospholipase D delta 243 481 - -
Bisa01g1207 865 SUPERFAMILY Phospholipase D/nuclease 559 796 - -
Bisa01g1207 865 Gene3D Endonuclease Chain A 238 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1207 Bisa-ChrBisa01 20146119 20150857 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1207 32 865 Phospholipase D Gene Family (Wang group) AT2G42010 69.722 0.0 1271