Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1200 ATGGGGACCGTGTGTGTAAAATCCCCATTCCACTCAATGTTCAGAAAACAAATGCCTGGGTTGTCTGTGAAAAGAAATGGAGCACCAATACCTAGGATACCCCAGCGGTGGCATGTCTGTAATCTTGTCTGGTCTAAAAATGTCAACGAGTTGGTAAGCACACATGGCTACTCCCAGAACCAGATAATAGTTTGGAGATACCCCACCATGTCAAAGTTGGCAACTCTTACGGGCCATACATATAGAGTTCTTTATCTTGCCATTTCTCCAGATGGACAGACTATTGTCACTGGAGCTGGTGATGAAACACTTAGGTTTTGGAATATATTCCCTTCCCCTAAATCTCAGAAAAATCGCGGTGGTGTTGCGCTGAAGCTGATCAACTCTGGTGTACATATACATTGGAAAGGAGCTGCAAAGTTATTTTTAGGCACATGCACTCAATATCTTGATTCAAATGATCTCTTGCAATCTATTGATGAAGAGAATGACTTTTTCAAGGAGGCTATTAATGACATGGCCGCTCGCAGCTTGCGGTGTGTCGCCACTGCATACAGATCATGTGAAATAGACAATGTTCCCACTAATGGTGAGGATTTGGCCAGCTGGTCCTTGCCGAAGGATGAGCTGGTTTTGCTTGCTATTTTTGGTATAAAGGATCCCTGCCGCCCTGGAGTTATAGATGCAGTCAAATTATGCACTGAAGTTGGTGTTAAGGTACGCATGGTTACGAGAGACAATATTCAGACGGCAAAGGCAATAGCTTTGGAGTGTGAGATATTATCTTCAAATGAAGATGTTACCAAGCCAAATGTAATTGAAGGAAAGACATTCCGCGCGTTATCTGAGAAAGAAGGGGAACAAGTTGCTAAAAAAATAACAGTGATGGGCAGGTCTTCTCTTAATGACAAGCTTTGGCTTGTGCAAGCACTGCGTAGGGGAGGAGATGTTGTTGATGTCACAGGAGATGGCAGCAATGATGCTCCAGCGCTTCATGAGGCATATATTCGTCTTTCAGTGGGCATTCAAGGAACTGAAGCTGCAAAGAAGGCTCAGATACTATAA 1065 0.4366 MGTVCVKSPFHSMFRKQMPGLSVKRNGAPIPRIPQRWHVCNLVWSKNVNELVSTHGYSQNQIIVWRYPTMSKLATLTGHTYRVLYLAISPDGQTIVTGAGDETLRFWNIFPSPKSQKNRGGVALKLINSGVHIHWKGAAKLFLGTCTQYLDSNDLLQSIDEENDFFKEAINDMAARSLRCVATAYRSCEIDNVPTNGEDLASWSLPKDELVLLAIFGIKDPCRPGVIDAVKLCTEVGVKVRMVTRDNIQTAKAIALECEILSSNEDVTKPNVIEGKTFRALSEKEGEQVAKKITVMGRSSLNDKLWLVQALRRGGDVVDVTGDGSNDAPALHEAYIRLSVGIQGTEAAKKAQIL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1200 354 ProSiteProfiles Trp-Asp (WD) repeats profile. 76 109 IPR001680 GO:0005515
Bisa01g1200 354 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 76 109 - -
Bisa01g1200 354 Pfam haloacid dehalogenase-like hydrolase 172 334 - -
Bisa01g1200 354 Pfam WD domain, G-beta repeat 72 108 IPR001680 GO:0005515
Bisa01g1200 354 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 125 226 IPR023299 GO:0000166
Bisa01g1200 354 SUPERFAMILY HAD-like 210 351 IPR036412 -
Bisa01g1200 354 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 25 112 IPR011047 -
Bisa01g1200 354 PRINTS P-type cation-transporting ATPase superfamily signature 236 246 - -
Bisa01g1200 354 PRINTS P-type cation-transporting ATPase superfamily signature 321 340 - -
Bisa01g1200 354 PRINTS P-type cation-transporting ATPase superfamily signature 345 354 - -
Bisa01g1200 354 PRINTS P-type cation-transporting ATPase superfamily signature 214 225 - -
Bisa01g1200 354 PANTHER CATION TRANSPORTING ATPASE 114 351 - -
Bisa01g1200 354 ProSitePatterns Trp-Asp (WD) repeats signature. 95 109 IPR019775 -
Bisa01g1200 354 SMART WD40_4 69 108 IPR001680 GO:0005515
Bisa01g1200 354 Gene3D - 132 221 IPR023299 GO:0000166
Bisa01g1200 354 Gene3D - 23 110 IPR015943 GO:0005515
Bisa01g1200 354 Gene3D - 222 351 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1200 Bisa-ChrBisa01 19987880 19990930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1200 110 351 Primary Pumps ATPases AT3G21180 66.942 1.31e-102 323