Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1199 ATGCATGTACAAGTGAATGATCATCGCAGTATTCACACAACACCATATCCTAAAATTAAAGTTAGCATGGCTTCCATCCTTCATTTTGGTGGGCTCTTCTTGTTTTCATGGATATTCACAATCATCGGAAAACCAACAGCAACCGCTGGAATCTTCTGTCCCAGCCGATGGGCTCTTGCCCACGCCACTTTTTACGGCGACGAAACTGCTTCTGCCACCATGGGCATCATGCCAGTGCTGTACAGGAGAGTGCCATGCTGGAGGAAGGGAGGGCTGAGATTCGCCTTCCAGGGTAACGGGTATTGGCTGTTGGTGTATGTGAAGAATGTGGGAGGTGGAGGGGACATAGGGGATATGTGGGTGAAGGGAAGCAGAACAGGTTGGATAAGGATGAACCATAACTGGGGAACCTCGTACCAGGCTTCTGCGACGTTCGGAGGACAGGCTCTGTCTTTTAGGATTAGTTCTTATACCACCAGGTAG 483 0.4948 MHVQVNDHRSIHTTPYPKIKVSMASILHFGGLFLFSWIFTIIGKPTATAGIFCPSRWALAHATFYGDETASATMGIMPVLYRRVPCWRKGGLRFAFQGNGYWLLVYVKNVGGGGDIGDMWVKGSRTGWIRMNHNWGTSYQASATFGGQALSFRISSYTTR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1199 160 SUPERFAMILY PHL pollen allergen 88 158 IPR036749 -
Bisa01g1199 160 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 101 160 IPR007117 -
Bisa01g1199 160 Pfam Expansin C-terminal domain 93 156 IPR007117 -
Bisa01g1199 160 PANTHER EXPANSIN-A15 70 156 IPR002963 GO:0009664
Bisa01g1199 160 Gene3D - 92 160 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1199 Bisa-ChrBisa01 19965890 19966742 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1199 75 160 Expansin Gene Family AT1G62980 70.930 2.77e-38 129