Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1196 ATGGCCACTCTTTACGCTACTCTTCGCTCCCTCCTCCCTCTTGAACACACCAAGGGGAAGCGTTCAATATCAGATCTCATGCAGGAGACGGTGAATTATATCAAACAGCTTCAGAAGAAGACAGAGGAGCTACGTGACAAGAGAGATAGGCTGAAAGAATTATGCAAACCTAGCTCTTCCAATGGAGGAGATGCAGTGATAGTTAGAAGCTGCTGGGGAGGAGTAGAGGTTGTCATAAACACAGCACTTGAAGAAGGGATTCCTCTCTCCAGAGTGCTTCCACTTCTAATTAGAGACGGGCTTTGTATTGTCAGTTGCAATTCTACTAAAGTAAAAGACAGATTATTTCACACTGTTGAATCAGAGGTGATCAATAACGGTGAGAGAAAAATCGACCTGTCCGAGCTACAACAGAATCTTAAGAGCTTAATCAGTAGATCTTAG 444 0.4347 MATLYATLRSLLPLEHTKGKRSISDLMQETVNYIKQLQKKTEELRDKRDRLKELCKPSSSNGGDAVIVRSCWGGVEVVINTALEEGIPLSRVLPLLIRDGLCIVSCNSTKVKDRLFHTVESEVINNGERKIDLSELQQNLKSLISRS 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1196 147 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 144 - -
Bisa01g1196 147 Pfam Helix-loop-helix DNA-binding domain 3 38 IPR011598 GO:0046983
Bisa01g1196 147 Coils Coil 27 54 - -
Bisa01g1196 147 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 37 IPR011598 GO:0046983
Bisa01g1196 147 Gene3D - 1 60 IPR036638 GO:0046983
Bisa01g1196 147 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 3 54 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1196 Bisa-ChrBisa01 19932875 19933804 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1196 1 140 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 45.161 4.46e-31 108
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g1196 HLH 3.4e-05 No_clan