Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1192 ATGCACTCATTCAATGCCATAACAAGTGGGTATGACAATAACTCCATGAATGAAAATGAATTGATCATGTCAGTTGGCCCTTGTCCTCATTTCTTGTTGGGGACAGAGATGGTGTTTGTGGGGAGGCAGTTAAGGATTAATAGTAATACTATTTGCAGGATAAACCCTGATTCTCTGCATTATTCTAGTTACTTGTTTCTGAGTATGGACGTGCTCCAGTGCATTGGATCAAAGGAAAATAAAAAGAAAAGGAAGCAATATCTAATAGTTGATGTTGTGTTTCTCATTGGACCAACCAACATATGTAAAGCTTCAATCTTTTTTGTGGCTGAGGAAAGATTTTACTTTTCTAGCATGAAAAGGGTCGGTCAAGTTCGTCTCTCTGATCATGCTATGTTGTTGGCTGCTCTGTTATTGTTTTCATCTCTCAGGGTCTCTCCAGAATCTGAAAAGGAGATTTTGCTTCAATTCAAGGGTAATGTCACAGATGATCCCCACAAAATCTTGAGTTCATGGGTTTTTAGTGGAAACCCATGTGAAAATTACATCGGTGTTTCCTGTAATTTAGAAGGATTTGTAGAAAAAATCGTTCTATGGAACACTAGCTTAGCTGGAGTATTGTCGCCTACGCTGTCACAGTTAAAATCGTTGAAGATTTTGACCTTGTTCGGGAATCATTTTTCTGGTAAAATCCCTGAAGAATATGCTGACTTTCCATCATTAGGGAAGATCAATCTGAGCTCAAATGCGTTATCTGGTTCGATCCCAGACTTCATAGGTAATATACAGAGCATTCGCTTTCTGGATTTATCACTGAATGGCTTCTCTGGAGAAATACCATCAGCTTTGTTCAAATACTGCCACAAAACCAAGTTCGTTTCTCTTTCTCATAACAACCTCTCAGGTTTAATTCCAGCTTCATTAGTGAACTGTTCGAACCTTGAAGGGTTTGATTTTTCCTTCAACCATCTGACTGGGACTATTCCTTATCGCCTTTGTGACATTCCAAAGCTATCCTATATATCACTGAGAAGCAATGCCTTATCAGGGAGTGAGCAAGATCAGATTTTTTTGGAATGCCAAAGCTTGGTACATCTGGATCTTGGTACAAATATATTCAGTGGTTTCGCACCATTCAACATCCTTGAAACCAAAAACCTCACTTATTTCAACATATCGTATAATGGGTTTGGTGGGCATATACCTGAGATGTCAACATGCAGTGAAAGACTAGAAATTTTGGATGCTTCAGGGAATGATTTGGATGGGGAAATTCCAGTGAGCATAACAGGATGTAAGAAGCTCAAGCTTTTGGCCTTGGAGTTTAATAGACTGAAAGGGAGTATTCCATTGGAAATTCAGAAGCTGGAGAGGCTATCAGTTATTAAATTGGGTAATAATTCAATAAAAGGAATGATTCCCAAGGGTTTTGGCAACATTGAGCTGCTTGAAATTCTGGATTTGCACAATCTCAACCTCACCGGTGAAATTCCCATCGATGTAAGCAATTGCAGGTTTCTTTTTGAGTTGAATGTTTCTGGGAATAACTTAGAAGGAGAGATTCCTCAGACCCTTTACAACATGACAAACCTCGAAGTCCTTGATCTACATCAAAACCAGCTCAATGGAAGCATCCCACCGAGCCTTGGAAACTTGTCAAGAATTCGATATCTAGATTTGTCACATAACTCACTTTCTGGTTCAATCCCTTCTTCCATTGGAAATTTACAGAACCTGGCACATCTTAATCTGTCATTCAACAATCTCTCTGGTGTCATTCCTAGCATACAAGGTTTTGGTTCATCTGCATTTTCCAACAATCCTTTTCTCTGTGGTGCTCCTTTGGATGACACCTCTTGCTCAGGAAGTAACACCGAATCACCTTCATCTTCTGGAAAGACTAAAGAGCTAAGTGTGTCTGCAATTGTTGCAATCGTTGCTGCAGCCGCGATTCTTACTGGGGTTTGTTTGGTGACCATCTTGAACGCCAAGGCTGGTAATAGAAACAAAGAAGATCAGATGATGATTGTTGAGAGCACACCTCTCGGATCAACAGAATCAAATGTTGTAATTGGAAAGCTGGTTCTTTTCAGCAAAAGCTTACCTTCAAAGTATGAAGATTGGGAGACAGGTACGAAAGCATTGCTGGATAAAGAGTCTTTGGTAGGTGGCGGATCGATCGGTACAGTGTACAAAACTGACTTTGAAGGTGGGATCTCAGTTGCAGTGAAAAAGCTTGAAACTTTGGGGAGGATAAGAAACCAGGATGAATTTGAACGTGAAACTGCGCGACTAGGCAACCTTAAACACCCAAATTTAGTTGCCTTTCAAGGTTACTATTGGTCCCCAACAATGCAGTTGATCATATCAGAGTTTGTCCCAAATGGTAGTCTCTTTGATAATCTACACAGTACTAGCAGTGGCAACAGGGAACTATATTGGTCTAGAAGGCTAAAAATTGCACTTGGAACTGCTAAAGCCCTTGCTTATCTGCACCATGATTGTCAACCTCCAATTCTCCATCTCAACATTAAATCCTCCAACGTTCTCCTAGATGAAAAATATGAAGCTAAGTTATGTGATTATGGGTTAGGAAAGTTGCTTCCTGTCTTGGACAATTACGGCGTGACAAAATTCCACAATGCTGTGGGATACGTTGCTCCAGAGTTGGCTCAGAGCTTAAGGCAGAGTGAGAAATGTGATGTTTATAGTTTTGGAGTGATTCTTTTGGAGCTGGTGACAGGGAGGAAGCCTGTGGAAAGTGTAGCAAGAAATGAGGTGGTGGTGTTGTGTGACTATGTTAGAGGGTTGCTGGAGGGTGGCTCAGCTTCAGGTTGCTTTGATAGAAGGTTGGTGGAAATGGTGGAGAGTGAATTAATTCAAGTTATGAGAATGGGACTAATTTGTACGTCGGAGGATCCATCTAAGAGACCAAGCATGGCTGAGATCGTCCAAGTCCTTGAGTCTATTGGAAATGCATCGGATTCGTGCTGTCTTGTACCAAAACCCGATGGCATCCTGCAGCTTTTGCTAGGAGAGATAATGCAGGAAGCAGATATGGAAATAGAGCATTTCTTCGTTGCTTATGAAGTTGACCTCGATTATGAATTTGATGCAGCTCGCTTCTTTGATTTCAGTCGAGATGAAACTCCTGATGAAGCTTCTCAAGCAGAACTTTGGTTTCAAACTGCCATAAGCTACCCTCCTTCTCGTCCAATGCGCTCTAATGTTCCTTTCCTGGTAAAGCCAGTACTCAATGCTGCTTTCTGGTTGCATTTTCTTGATCTTGATAGGCATAGGTGCATTTATAAAGATTTTATTCTCATAATGGCTCGGTTAAGAATACTACAACCTTTTGTTACAGAGCTAGTGGCCACAGAAGACACTCTCTTCGAGATCAACATCTCTCCGAAACCCACATGCCTAGAACTCACAAGTACCATGGATGATAATGATTCCAATTTTTCGTTGGAGATGGAATTTTCTGAGGCAGCTATTGACAATCAAAGTCTAAAAGCAGTTGGCGGGAAGATCTCTGGCTTGCAGGGTGGAATTCTACATAATGGTGCTAAGCAACCCCAGCAAGTGACTACAGGACTTACTTTTTGCGGTATGACAATCAGTGACAGTTTAAATTCTGAGGTTAAATCTGTTGTGCCAAGGAGCTCAACATGGATGAAACCTACCACTAGTCAGTTGACCAAGCAAAAAAGCCCCCCTCGAATTGTTGGCTCCAGATTTCAGAAGCTACTAGCACAGAACAAGGAAGGGATTTTATCTTCTTGGGTAGAAAACCAAGCTACCAAGCGGCAGAAATTAGAGGGTGGCCTGTTGCACAGGGTCTGTAAATTGTTCTATTCTTTCTATTCTGATTTTCTAATACTGGAAGAATTTGTTGGAATTGTATGTGTGGGCCTTTTAGATACAGAGCTAATCTCATCTTCTCTATGTCAGGTAGCTAATTTGAGGCAGCAAATTAATTTGGTCCACAAGGCACCTAAGAAGGCTGTAATTGTTGGTCAAAACTCTACACATGCCAAACTGAAGCTTACTATTCCGAGAGAGCCTGACCTTGAAACAGCACATAGAGCGCAAAGGATGAGGCTGAAACTAGAGGAAAAGAACATACCTGCCCCCAGATTTAGAGCGAGCCCATTGAACAGAAAAATTCTAGATGCTCCTTCATTGCCACTTCACAAAAGAAGCACTCCACGGTTGCCAGAATTTCACGAGTTTCACCTGAAGACAATGGAGAGGGCAATGCAACACAGATATGCTAATTCATCATCATCTTCACTTTACTTCAATGATTCTGATGAGGGTTTGGACAAACATAGTGCTAATTGTGCTACAGAAAATATAATTAGGAATTTGAACAGGCCTAGCGTCAATGTTGCTCCAAAGCATGACGGGCTAAAAGTTGCACATAATTTTAAAGGTCAGCCACTTAATGAGAAGATACTTTCAAGTAAAGGAGATATTGGTACCTTCCAAAACAGTAAGCAGGAAACCACAGTGACAGTGCCAATGGAGTTTAATTTCCACACCGAAAAGAGTGGTCAGCTTACCCCACCAATTGAGATGTTCAGCAAGCTGTCCTTAAACTCTGAACTCCAGCCAAACAATGGATCTCAGTTGAAACTGCCTCGACATTCCACCATGTTTAGAAAGAGCTCGGGCGCTCGGTACCCAGAAGGAGCACACAATGTGCTTAGTGTTAACGGCACAGGCTTCCAACAATGCGTGGCACCGAATTCAACGGAACCACTTGCTACTGGAAATGATGAGATTGTTCTCTCATCCCCTGGAAGAAAATGGTACATCTGTGGTGTTGGCCAGCATTGTGAAGTTGGTGGAATGAAGCTTGCAATAAATGTGACTGAATCCCCTGCATCTTCACCTTCTTCTCCTAACCCAGTTTCGGCTGCAACCACTGGCTCACCCTTCTGTTCTGCATGGATTATGTCCATTTTCGGCGTCCTCGCAATGGTTATGGTATAA 5001 0.4171 MHSFNAITSGYDNNSMNENELIMSVGPCPHFLLGTEMVFVGRQLRINSNTICRINPDSLHYSSYLFLSMDVLQCIGSKENKKKRKQYLIVDVVFLIGPTNICKASIFFVAEERFYFSSMKRVGQVRLSDHAMLLAALLLFSSLRVSPESEKEILLQFKGNVTDDPHKILSSWVFSGNPCENYIGVSCNLEGFVEKIVLWNTSLAGVLSPTLSQLKSLKILTLFGNHFSGKIPEEYADFPSLGKINLSSNALSGSIPDFIGNIQSIRFLDLSLNGFSGEIPSALFKYCHKTKFVSLSHNNLSGLIPASLVNCSNLEGFDFSFNHLTGTIPYRLCDIPKLSYISLRSNALSGSEQDQIFLECQSLVHLDLGTNIFSGFAPFNILETKNLTYFNISYNGFGGHIPEMSTCSERLEILDASGNDLDGEIPVSITGCKKLKLLALEFNRLKGSIPLEIQKLERLSVIKLGNNSIKGMIPKGFGNIELLEILDLHNLNLTGEIPIDVSNCRFLFELNVSGNNLEGEIPQTLYNMTNLEVLDLHQNQLNGSIPPSLGNLSRIRYLDLSHNSLSGSIPSSIGNLQNLAHLNLSFNNLSGVIPSIQGFGSSAFSNNPFLCGAPLDDTSCSGSNTESPSSSGKTKELSVSAIVAIVAAAAILTGVCLVTILNAKAGNRNKEDQMMIVESTPLGSTESNVVIGKLVLFSKSLPSKYEDWETGTKALLDKESLVGGGSIGTVYKTDFEGGISVAVKKLETLGRIRNQDEFERETARLGNLKHPNLVAFQGYYWSPTMQLIISEFVPNGSLFDNLHSTSSGNRELYWSRRLKIALGTAKALAYLHHDCQPPILHLNIKSSNVLLDEKYEAKLCDYGLGKLLPVLDNYGVTKFHNAVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESVARNEVVVLCDYVRGLLEGGSASGCFDRRLVEMVESELIQVMRMGLICTSEDPSKRPSMAEIVQVLESIGNASDSCCLVPKPDGILQLLLGEIMQEADMEIEHFFVAYEVDLDYEFDAARFFDFSRDETPDEASQAELWFQTAISYPPSRPMRSNVPFLVKPVLNAAFWLHFLDLDRHRCIYKDFILIMARLRILQPFVTELVATEDTLFEINISPKPTCLELTSTMDDNDSNFSLEMEFSEAAIDNQSLKAVGGKISGLQGGILHNGAKQPQQVTTGLTFCGMTISDSLNSEVKSVVPRSSTWMKPTTSQLTKQKSPPRIVGSRFQKLLAQNKEGILSSWVENQATKRQKLEGGLLHRVCKLFYSFYSDFLILEEFVGIVCVGLLDTELISSSLCQVANLRQQINLVHKAPKKAVIVGQNSTHAKLKLTIPREPDLETAHRAQRMRLKLEEKNIPAPRFRASPLNRKILDAPSLPLHKRSTPRLPEFHEFHLKTMERAMQHRYANSSSSSLYFNDSDEGLDKHSANCATENIIRNLNRPSVNVAPKHDGLKVAHNFKGQPLNEKILSSKGDIGTFQNSKQETTVTVPMEFNFHTEKSGQLTPPIEMFSKLSLNSELQPNNGSQLKLPRHSTMFRKSSGARYPEGAHNVLSVNGTGFQQCVAPNSTEPLATGNDEIVLSSPGRKWYICGVGQHCEVGGMKLAINVTESPASSPSSPNPVSAATTGSPFCSAWIMSIFGVLAMVMV 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1192 1666 Pfam Plastocyanin-like domain 1563 1618 IPR003245 GO:0009055
Bisa01g1192 1666 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g12460 147 285 - -
Bisa01g1192 1666 SUPERFAMILY Cupredoxins 1563 1626 IPR008972 -
Bisa01g1192 1666 SMART LRR_typ_2 528 552 IPR003591 -
Bisa01g1192 1666 SMART LRR_typ_2 576 598 IPR003591 -
Bisa01g1192 1666 SMART LRR_typ_2 456 479 IPR003591 -
Bisa01g1192 1666 Gene3D Ribonuclease Inhibitor 287 355 IPR032675 -
Bisa01g1192 1666 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 292 987 - -
Bisa01g1192 1666 FunFam Putative LRR receptor-like serine/threonine-protein kinase 693 792 - -
Bisa01g1192 1666 ProSiteProfiles Phytocyanin domain profile. 1504 1628 IPR003245 GO:0009055
Bisa01g1192 1666 Gene3D Ribonuclease Inhibitor 356 628 IPR032675 -
Bisa01g1192 1666 SUPERFAMILY L domain-like 148 403 - -
Bisa01g1192 1666 Gene3D Transferase(Phosphotransferase) domain 1 797 996 - -
Bisa01g1192 1666 FunFam Putative LRR receptor-like serine/threonine-protein kinase 794 994 - -
Bisa01g1192 1666 Gene3D - 1554 1627 IPR008972 -
Bisa01g1192 1666 CDD STKc_IRAK 722 990 - -
Bisa01g1192 1666 SUPERFAMILY L domain-like 357 615 - -
Bisa01g1192 1666 SUPERFAMILY Protein kinase-like (PK-like) 717 988 IPR011009 -
Bisa01g1192 1666 Gene3D Ribonuclease Inhibitor 146 286 IPR032675 -
Bisa01g1192 1666 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g12460 286 623 - -
Bisa01g1192 1666 Pfam Leucine rich repeat 509 565 IPR001611 GO:0005515
Bisa01g1192 1666 Gene3D Phosphorylase Kinase; domain 1 716 796 - -
Bisa01g1192 1666 ProSiteProfiles Protein kinase domain profile. 716 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1192 1666 Pfam Protein kinase domain 718 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g1192 1666 Pfam Leucine rich repeat N-terminal domain 148 188 IPR013210 -
Bisa01g1192 1666 Pfam Cell cycle regulated microtubule associated protein 1348 1514 IPR027330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1192 Bisa-ChrBisa01 19871681 19885684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1192 149 996 Receptor kinase-like Gene Family AT1G62950 63.468 0.0 1069
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Bisa01g1192 Pkinase 1.9e-38 CL0016