Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1186 ATGGACCCAATTACCGCACACGGCCATTCTCTTCCTCCTCCTTTCCATACGAGAGATCTCCATCTTCACCATCACCAGCAGCAGCAGCAATTCCACTCCCTTCACCAAAGCACCGAAGACGAGCAAAGCGGAAGCAGCGGCGGCCTCAACCTCTCCCACAAAAGGGACCGCGAAGACAATAGCAACAACAGCGACAAAGACGCCGCCGCCGCCTCCGCCGGTGATGCCGAGATCACCCGACGCCCCCGAGGCAGACCCGCGGGCTCCAAGAACAAGCCCAAGCCCCCCATCATCATCACCCGCGACAGCGCCAACGCCCTCCGCACCCACGTCATGGAGGTTGCCGACGGCTGTGACATCGTCGACAGCATCTCCACCTTCGCCCGCCGCCGACAGCGAGGCATCTGCATAATGAGTGGCACCGGCACCGTCACCAATGTCACCCTCAGGCAACCCGCTTCCTCCGGCGCCGTTGTCACTCTCCACGGGAGGTTCGAGATACTCTCGCTAGCTGGATCGTTCTTGCCACCGCCGGCTCCCCCAGCGGCGTCGGGGCTGACGATATACCTGGCGGGAGGGCAAGGGCAGGTGGTAGGCGGAAGCGTGGTTGGGACACTGGTAGCTTCAGGGCCGGTAGTGATCATGGCGGCGTCGTTCAGCAACGCGGCGTACGAGAGGCTGCCTTTGGAAGAAGAGGACCCGTCCATGGCAATGCCAGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGAGGCGGCATGGGGTCGCCGACGGGAGCGGGTCAGCAGCAGGGGGGTCAGCTGTTAGGGGATGCAAATGCAACGGCTCCGCTTTTCCATGGTTTGCCTCCCAATCTTCTAAATTCTATTCAGATGCCATCGGAGGCATTCTGGGCCACCGGTCGCCCTCCATACTGA 915 0.6273 MDPITAHGHSLPPPFHTRDLHLHHHQQQQQFHSLHQSTEDEQSGSSGGLNLSHKRDREDNSNNSDKDAAAASAGDAEITRRPRGRPAGSKNKPKPPIIITRDSANALRTHVMEVADGCDIVDSISTFARRRQRGICIMSGTGTVTNVTLRQPASSGAVVTLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLVASGPVVIMAASFSNAAYERLPLEEEDPSMAMPGGGGGGGGGGGGGMGSPTGAGQQQGGQLLGDANATAPLFHGLPPNLLNSIQMPSEAFWATGRPPY 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1186 304 ProSiteProfiles PPC domain profile profile. 104 240 IPR005175 -
Bisa01g1186 304 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 299 IPR014476 GO:0003680
Bisa01g1186 304 PIRSF ESCAROLA 18 304 IPR014476 GO:0003680
Bisa01g1186 304 CDD DUF296 108 219 IPR005175 -
Bisa01g1186 304 FunFam AT-hook motif nuclear-localized protein 107 234 - -
Bisa01g1186 304 MobiDBLite consensus disorder prediction 232 268 - -
Bisa01g1186 304 Gene3D - 107 235 - -
Bisa01g1186 304 Pfam Plants and Prokaryotes Conserved (PCC) domain 108 221 IPR005175 -
Bisa01g1186 304 MobiDBLite consensus disorder prediction 27 50 - -
Bisa01g1186 304 MobiDBLite consensus disorder prediction 1 98 - -
Bisa01g1186 304 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1186 Bisa-ChrBisa01 19803387 19804301 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1186 1 304 AT-hook Motif Nuclear Localized (AHL) Family AT4G22810 56.725 1.82e-88 265