Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1181 ATGTATGACTTAAGTAAGGTTTTAAGTATGGAGGTCAGGGATGGTGTTACTAGGGGGGTCACGGTGGTCGGATCAGATGCTCCGTCGGACTACCATGTAGCTCCGAGGACCGTAAACCAATCTTCCACTGGTGGATCAACGACGCCGGCGCCTCAAGGGAGTGTTCTGACACCGCAGCCGGCGACTACGGGGGCGGCGCCGGCAGCCACAACGATGCCGGCCAAGAAGAAGAGGGGTCGGCCAAGAAAGTACGGACCAGACGGGTCAGTGACGATGGCGCTATCTCCGACGCCGATATCTTCCTCGGCTCCGCCGCCAATAATCGATTTCTCGGCGGGGAAACGCGGTAAAGTGCGGCCAGCTAGCTCACTGAGCAAACCCAAATTTCAAGTGGAGAATTTAGGTGAATGGATTGCATGCTCCGTTGGTACTAATTTTACACCCCATATCATCACTGTTAATTCTGGGGAGGATGTCACTATGAAGGTAATATCATTTTCTCAGCAAGGGCCACGAGCTATATGCATTCTTTCTGCAAATGGAGTCATATCGAGTGTCACCCTTCGTCAGCCTGATTCTTCTGGGGGCACATTGACATATGAGGGACGTTTTGAAATTCTGTCATTATCTGGCTCATTCATGCCAAATGAAAGTGGAGGAACTCGAAGCAGATCTGGTGGCATGAGTGTCTCCTTAGCAAGTCCCGATGGACGCGTTCTAGGGGGTGGACTGGCTGGTCTATTGGTAGCGGCAAGTCCTGTGCAGGTAGTGGTGGGCAGTTTTCTGGCGGGAAATCAACATGATCTCAAGACAAAGAAACAGAAACATGAGATTGTATCAAATGCCACTCCAACTGCAGTTATTCCCTTGTCTACTGCTGATCCAATACCCAACCTTTCATCTTCATCTTCCTTCCCTGGTGATACTTGGTCTGCATTGCCACCAGATACGAGGAATAATAAACCAACCGACGTTAACGTGTCTCTGCCTACAGGATAA 999 0.5045 MYDLSKVLSMEVRDGVTRGVTVVGSDAPSDYHVAPRTVNQSSTGGSTTPAPQGSVLTPQPATTGAAPAATTMPAKKKRGRPRKYGPDGSVTMALSPTPISSSAPPPIIDFSAGKRGKVRPASSLSKPKFQVENLGEWIACSVGTNFTPHIITVNSGEDVTMKVISFSQQGPRAICILSANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPNESGGTRSRSGGMSVSLASPDGRVLGGGLAGLLVAASPVQVVVGSFLAGNQHDLKTKKQKHEIVSNATPTAVIPLSTADPIPNLSSSSSFPGDTWSALPPDTRNNKPTDVNVSLPTG 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1181 332 FunFam AT-hook motif nuclear-localized protein 1-like 148 279 - -
Bisa01g1181 332 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 44 297 IPR039605 GO:0003680
Bisa01g1181 332 MobiDBLite consensus disorder prediction 298 332 - -
Bisa01g1181 332 Pfam Plants and Prokaryotes Conserved (PCC) domain 148 261 IPR005175 -
Bisa01g1181 332 Gene3D - 148 281 - -
Bisa01g1181 332 CDD DUF296 147 238 IPR005175 -
Bisa01g1181 332 MobiDBLite consensus disorder prediction 24 88 - -
Bisa01g1181 332 MobiDBLite consensus disorder prediction 34 66 - -
Bisa01g1181 332 SUPERFAMILY AF0104/ALDC/Ptd012-like 145 264 - -
Bisa01g1181 332 ProSiteProfiles PPC domain profile profile. 143 285 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1181 Bisa-ChrBisa01 19740431 19744839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1181 7 329 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 61.905 3.22e-126 363