Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1159 ATGGGGAGGCAACCCTGCTGTGACAAACTTGAGGTGAAGAAAGGACCATGGACTGCTGAGGAAGACAAGAAGCTCATCAACTTCATTCTCACCAATGGTCACTGCTGCTGGCGAGCCGTTCCAAAGCTTGCCGGGCTTAGGCGTTGTGGCAAGAGTTGCCGGCTTCGCTGGACTAACTATCTTCGCCCTGACTTGAAGAGAGGCCTCCTCACTGAAGCAGAAGAGCACCTTGTTATTGACCTCCATTCTCGTCTTGGCAACAGGTGGTCCACGATAGCTGCCAAATTACCAGGAAGAACAGACAATGAGATTAAGAATCACTGGAACACCCACATCAAGAAAAAGCTGCTAAAGATGGGGATTGATCCGGTCACTCATGAACCTCTCAACAAACAAGCTGCCTCCCAGGATACATCATCCCCTGCGCAGCATTTGCCACAATCTGGCAATAACCATCAGGTTAAGATTCACAATTCAGAGGGGAGTTCAATCTCATCGCCTGCTGAAAATTCTTGTGGGGATGGATCCCTTTTGCTAGATAGCATTTGCAGCGACCACTCTCTCATGAACAGCTTCTGGCTGGACGAAACATCACTGGTGGATGCATTATGGGGAAGTACACCTGAATCTGCTGCAGAGAATACTAATAATGATATGGCCCTGCCATCTTGGGAGGACAACTGTGCTTGGTTATTGGACTCCCAGGACTTTGGTGTCCATGATTTGGGTTTCAATTGTTTCAACGAGATTGAGTCAAATATGCAACAAACATTAGGAATGGAGCAGAAGGGGCATTAA 798 0.4787 MGRQPCCDKLEVKKGPWTAEEDKKLINFILTNGHCCWRAVPKLAGLRRCGKSCRLRWTNYLRPDLKRGLLTEAEEHLVIDLHSRLGNRWSTIAAKLPGRTDNEIKNHWNTHIKKKLLKMGIDPVTHEPLNKQAASQDTSSPAQHLPQSGNNHQVKIHNSEGSSISSPAENSCGDGSLLLDSICSDHSLMNSFWLDETSLVDALWGSTPESAAENTNNDMALPSWEDNCAWLLDSQDFGVHDLGFNCFNEIESNMQQTLGMEQKGH 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1159 265 PANTHER F14D16.11-RELATED 1 159 - -
Bisa01g1159 265 Pfam Myb-like DNA-binding domain 71 111 IPR001005 -
Bisa01g1159 265 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa01g1159 265 CDD SANT 16 61 IPR001005 -
Bisa01g1159 265 SMART sant 66 114 IPR001005 -
Bisa01g1159 265 SMART sant 13 63 IPR001005 -
Bisa01g1159 265 FunFam MYB transcription factor 11 67 - -
Bisa01g1159 265 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa01g1159 265 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bisa01g1159 265 Gene3D - 11 67 - -
Bisa01g1159 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa01g1159 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa01g1159 265 CDD SANT 71 112 IPR001005 -
Bisa01g1159 265 FunFam MYB transcription factor 70 147 - -
Bisa01g1159 265 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa01g1159 265 Gene3D - 70 155 - -
Bisa01g1159 265 MobiDBLite consensus disorder prediction 130 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1159 Bisa-ChrBisa01 19424694 19425800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1159 1 257 MYB Transcription Factor Family AT4G12350 56.738 5.60e-97 284
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g1159 Myb_DNA-binding 2.5e-13 CL0123