Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1147 ATGTCATCCTCTTCTTCTACTTCTACTACTGCCTCTACCTTATCCCAGCTGGACCACTTCCCTCCTTCCGACCACCTTTGCTATGTCCACTGCAACCTTTGTGCCACTGTCCTCGCCGTGAGTGTTCCAAGCACGAGCTTGTTCAAGACGGTGACAGTGCGATGCGGGCACTGCACCAACCTGATGCCGGTGAACATGCGTGGTTCGCTTCTTCCATCGCCCAATCAATTCCATTTGCCTCACTCTTTCTTCTCTCCCTCTCTTAATCTCCTGGAGGAGATTCCAAATCCATCCCCAAATTTTGTGGTGAACCAGTCAAACTCATCAAACGATCACTTCTGTGTGCCTCCTATTCCTACTAGGGCTTTAGCCGATGAGCTTCCACGGCCACCCCTCATAAATCGACCCCCTGAGAAGAGGCAGAGAGTCCCCTCAGCCTACAACCGCTTCATTAAGGACGAGATCCAACGCATCAAGTCTGTCAATCCTGATATATCCCACAGGGAAGCCTTCAGCGCAGCTGCCAAGAATTGGGCCCACTTCCCTCACATCCACTTTGGTCTCATGCCTGGTCACACTGTGAAGAAGACAAATGTGCGCCAGCAGGAAGGAGAGGACGGTTGCATGAAAGATGGGTTTTTTGCTTCGGCCAATGTTGGTGTTTCTCCCTACTAA 675 0.5126 MSSSSSTSTTASTLSQLDHFPPSDHLCYVHCNLCATVLAVSVPSTSLFKTVTVRCGHCTNLMPVNMRGSLLPSPNQFHLPHSFFSPSLNLLEEIPNPSPNFVVNQSNSSNDHFCVPPIPTRALADELPRPPLINRPPEKRQRVPSAYNRFIKDEIQRIKSVNPDISHREAFSAAAKNWAHFPHIHFGLMPGHTVKKTNVRQQEGEDGCMKDGFFASANVGVSPY 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1147 224 CDD HMG-box_SF 142 178 - -
Bisa01g1147 224 FunFam Axial regulator YABBY 133 204 - -
Bisa01g1147 224 Gene3D High mobility group box domain 133 184 IPR036910 -
Bisa01g1147 224 PANTHER PROTEIN YABBY 6-RELATED 1 200 IPR006780 GO:0007275
Bisa01g1147 224 Pfam YABBY protein 22 188 IPR006780 GO:0007275
Bisa01g1147 224 SUPERFAMILY HMG-box 132 181 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1147 Bisa-ChrBisa01 19248271 19251388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1147 33 222 C2C2-YABBY Transcription Factor Family AT4G00180 58.852 2.58e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa01g1147 YABBY 1.6e-67 CL0114