Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1144 ATGGATTCGTCTCATGTTTCTCCTGTTCTCACTGATCCTGTCCCAATCAATAAGTCCAGACTAGGAATCTATTCCAATATTCTTAGTTACTCCCAGCAAGATCCACCACTCTCACTCTCTCCCACCAAGTATTCAAGAAGCAGCTCGAGGAAAATTTCAGGAAGCCTCGATGATGTTCGCTCCAATGGCTGGCTCGATGCCATGAAGGCCTCTTCTCCTCCTCGGAAGAAGCAATCCAAACGTTGTAACTCCCAGGTTGCTTCCACCGACTCCGACACTGAAGATGGCTACTGTTCCTGGTTGCTAGAATATCCATCAGCATTGGAGCGTTTTGGGAAACTGATTGAGCATGCAAATAACAAGAAGATTTTAATGTTCCTGGACTACGATGGCACTCTTACACCAATAGTAGATGATCCTGATTGTGCTTTTATGTCTGAAGCTATGCGGACAGCGGTGAGAAGCGTGGCAAAGTATTTTCCTACGGCAATCATCAGTGGGAGAAGCAGAGACAAGGTTTATGATTTAGTTAAACTAACGGAACTCTACTATGCTGGGAGTCATGGGATGGATATTATGGGGACTCCCTGTCACACTCTGTCCAATAGCCATCCGAATTGTGTTAAGTCCACTGACCAACAGGGAAAGGAGATAACTCTGTTTCAACCAGCAAGAGAATTCCTACCCATGATTGATGAAGTTTTTAGAAGGCTCGTGGAGATCACAACAGATATAAAAGGCGCAAAGGTTGAAAATCAGAAGTTTTGCGTTTCTGTACATTATCGTAATGTAGAAGAAAGTAACTGGACAGCTGTTGGACAATGTGTGCATGACATGTTAAAAAATTACCCTCTTTTGCGTTCAACTCACGGACGGAAGGTTTTAGAAGTCCGCCCTGTGATTGATTGGAACAAAGGAAAAGCAGTTGAATTTTTACTTGAATCTCTGGGGTTAAGTGACAGGGATGACGTGCTTGCCATCTACATAGGAGATGATAAGACCGATGAAGATGCATTTAAGGTACTGAAAGACAGCAGTAGAGGTTATGGAATTTTGGTTTCATCTTCGAGAAAACAAAGCCATGCTTTTTATTCTCTCCGGGACCCAAATGAGGTCAAGAAATTTTTGCAACTTCTGGTGAATTGGAAGAAGCAAGAAGAAAACAAGCACGACGGGAGACATTCGCATCGCCCTTCCAAGAGCACATGCTCAACAACTAGTGTATTGAGGCCACCACTATCTTCCCCTTCTGCACCATCGCAACTAGCATCTCACCAGCTGATGTGCCTTCGTGGAGTCTGTTCCTCGACGTCGACACATCCAGGGTCAACAAACTTGGATTCACCAGCATTTGGTGCGTTATGCTCACCTACTTTCTCTCCCTCCCTGAGACTTGTAGATCCAGTTCCAGATTATAGTGTTCTCGCATTTCACCAGCTCTAA 1443 0.4442 MDSSHVSPVLTDPVPINKSRLGIYSNILSYSQQDPPLSLSPTKYSRSSSRKISGSLDDVRSNGWLDAMKASSPPRKKQSKRCNSQVASTDSDTEDGYCSWLLEYPSALERFGKLIEHANNKKILMFLDYDGTLTPIVDDPDCAFMSEAMRTAVRSVAKYFPTAIISGRSRDKVYDLVKLTELYYAGSHGMDIMGTPCHTLSNSHPNCVKSTDQQGKEITLFQPAREFLPMIDEVFRRLVEITTDIKGAKVENQKFCVSVHYRNVEESNWTAVGQCVHDMLKNYPLLRSTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSDRDDVLAIYIGDDKTDEDAFKVLKDSSRGYGILVSSSRKQSHAFYSLRDPNEVKKFLQLLVNWKKQEENKHDGRHSHRPSKSTCSTTSVLRPPLSSPSAPSQLASHQLMCLRGVCSSTSTHPGSTNLDSPAFGALCSPTFSPSLRLVDPVPDYSVLAFHQL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1144 480 NCBIfam HAD-IIB family hydrolase 124 344 IPR006379 -
Bisa01g1144 480 Gene3D - 228 396 IPR023214 -
Bisa01g1144 480 Gene3D - 123 209 IPR023214 -
Bisa01g1144 480 MobiDBLite consensus disorder prediction 77 93 - -
Bisa01g1144 480 MobiDBLite consensus disorder prediction 399 420 - -
Bisa01g1144 480 CDD HAD_TPP 124 372 - -
Bisa01g1144 480 SUPERFAMILY HAD-like 124 384 IPR036412 -
Bisa01g1144 480 MobiDBLite consensus disorder prediction 35 55 - -
Bisa01g1144 480 NCBIfam trehalose-phosphatase 222 380 IPR003337 GO:0003824|GO:0005992
Bisa01g1144 480 FunFam Trehalose 6-phosphate phosphatase 230 389 - -
Bisa01g1144 480 MobiDBLite consensus disorder prediction 67 93 - -
Bisa01g1144 480 MobiDBLite consensus disorder prediction 386 420 - -
Bisa01g1144 480 Pfam Trehalose-phosphatase 126 369 IPR003337 GO:0003824|GO:0005992
Bisa01g1144 480 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 43 390 IPR044651 GO:0004805|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1144 Bisa-ChrBisa01 19171325 19174622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1144 125 379 Trehalose Biosynthesis Gene Families AT1G70290 26.277 4.45e-09 57.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g1144 01 19171325 19174622 Bisa01g1144 01 19171325 19174622 ECH