Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1125 ATGCGACGAACAAACGACGACCTCTCCCTTGGTCGCAGAGCAGAGCAGTGCATTTCTGGTGCGATGGGTGCCTACAAGTATGTATCTGAGCTATGGCGCAAGAAGCAGTCTGATGTGATGAGATTCTTGCAGAGGGTGAGGTGCTGGGAGTACCGTCAGCAGCCTTCCATTGTTCGATTGACAAGGCCTACTCGCCCTGACAAGGCTCGTCGCTTGGGTTACAAAGCTAAGCAGGGTTATGTGGTTTACCGTGTTCGTGTCCGGAGGGGTGGCCGGAAGAGACCAGTTCCCAAAGGTATTGTGTATGGGAAGCCCACAAATCAAGGTGTTACCCAACTGAAATTTCAGCGGAGCAAGAGGTCAGTTGCAGAGGAGCGCGCTGGACGGAAGTTGGGTGGCCTTAGGGTTCTCAATTCTTACTGGGTGAATGAGGACTCAACTTACAAATATTTTGAGATAATCCTGGTGGACGTTGCCCACAATGCTGTCAGAAATGATCCAAGGATTAATTGGCTTTGCAATCCCGTCCACAAACACAGGGAGCTGCGTGGTCTCACTTCTGCTGGTAAAAAATACAGGGGTCTACGGGGCAGAGGTCACCTCTACCACAAAGCCCGCCCATCGCGCAGGGCTACATGGAAGAGAAACAATACTCTTTCCCTTCGTCGCTACCGCTGA 678 0.5177 MRRTNDDLSLGRRAEQCISGAMGAYKYVSELWRKKQSDVMRFLQRVRCWEYRQQPSIVRLTRPTRPDKARRLGYKAKQGYVVYRVRVRRGGRKRPVPKGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWVNEDSTYKYFEIILVDVAHNAVRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGRGHLYHKARPSRRATWKRNNTLSLRRYR 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1125 225 SMART Ribosomal_L15e_2 23 214 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bisa01g1125 225 Gene3D Ribosomal protein l15e 22 225 IPR024794 GO:0003735|GO:0005840
Bisa01g1125 225 FunFam Ribosomal protein L15 22 225 - -
Bisa01g1125 225 Pfam Ribosomal L15 23 211 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bisa01g1125 225 PANTHER RIBOSOMAL PROTEIN L15 22 225 IPR000439 GO:0003735|GO:0005840|GO:0006412
Bisa01g1125 225 ProSitePatterns Ribosomal protein L15e signature. 67 90 IPR020925 GO:0003735|GO:0005840|GO:0006412
Bisa01g1125 225 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 21 216 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1125 Bisa-ChrBisa01 18796145 18798978 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1125 22 225 Cytoplasmic Ribosomal Protein Gene Family AT4G16720 92.647 1.43e-127 357