Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1093 ATGGATGAACTCAACGAAGGACCGCCTAATAGAGAACTCTACGCACTCTTACATTTGTCCCCGGAAGCTTCCGATGAAGAAATCCGAAGAGCTTATCGGCAATGGGCACAAGTGTATCACCCCGATAAATACCGAGCTCCCCATATGAAAGATATTGCTACTGAAAACTTTCAACGCATTTGTCAAGCGTACGAAGTTTTGTCAGATCCAAATAAAAGGCAAATATATGACATCTATGGCATGGAGGGTTTGACCACTGGTTTGGAACTTGGTTCAAAGCTAGATAAGGCAGAAGAGATAAAGGCAGAATTGGAAAGACTACGGCGACTGAAGGAGCAAGAGAAAATAGCTGCGCATTTTAGAACTTCTGGTACAATTCTGGCCAGTATGTCTTTGCCACACTTTCTAAGAGGTGATGGCATCATGAGAGGAATGGCTATGGCCAGTGAAGTTCAGTCTCAGTTATCAAAACGCAACACTTTTGCAATTGGTGGCAATTTAGCAGTCAACGGAAATGCAGGTGGTGGGGCTGCTACTGCCTTGTTTAGGCATGAAATTTCAGAAGTTTCTTCTGTAGAGTTTATGGCTTCAGCTGGTTTGCGTTCACTAATTGGGGTGCAAACTTCTCGTCAATTATCAGTACACTCAGCTGCAACAATGGGCGTTGCTATGTCTTTGCAAGATGGTTCATTGAATCTTTCTAATTCATGGACCCGCCAATTATCAGAAACAGCAAGGGGACATATACAGCTTGCTTTGGGATCTCAATCATCTATAGCTGTAGGGTGGCAAAAGAAAGATGAGAGAAGATCTGCCTCTGGGGAAGTGAAGTTTGGCACAAGTTTGATTGACGTAACAGCTCATTATACTCATCGCTTTTCTTCCAAATCTCATGGCCGTATTGGGGGCAGAGTTGGGAGCTCTGCCCTTGAGATTGAAATTGGTGGCGGGAGGAAGTTATCTAAATTCAGCACCGTCCGCTGGTTATATACAATAGGAATGCAGGGTATTATTTGGAAATTTGAACTGCATCGCGGTGGCCAGAAGTTGATTATTCCTATTTTGCTGACCAGGCATTTGAACCCCATCTTTGCCGGTGGAGCATTTTTTATTCCAGCATCTCTTTACTTTCTTCTGAAGAAATTTCTAATTAAACCCTATTACCTTAGAAGGAATAAGCAGAAGGGTCTAGAGAATGCGGAGAAAACTTCAGCTCAGGTTCAAGAAGCGAAGGCCACAGCAGAGAAAGCTCAGCAATTGCAACAAACTGTGGCTAATAGGAAAAGAAATAAGCAACTAGAAACAGGCGGTCTGGTTATTACCAGAGCACTGTATGGAAATCAAGTTGTTTTGAACAAGATAAACACATCAAGTGAAACAAGTCATGAATCAACTTCGGAAGTCATTGATGTTACAATACCCCTCAATTTCCTTGTTAGTGATTCTGGCCAACTCAAGCTTCATGAAGGTGTAAAAAAATCAGGCATCATGGGCTTTTGTGATCCATGTCCAGGAGAACCTAAAACGTTGTATGTGGAGTACTCTTATGCTGGCAAGCAATACAAGGTCCTGGTTGGTGATTATGAAGATTTATTGATCCCCCAGGGCGCTCACAGGATCTAA 1623 0.4282 MDELNEGPPNRELYALLHLSPEASDEEIRRAYRQWAQVYHPDKYRAPHMKDIATENFQRICQAYEVLSDPNKRQIYDIYGMEGLTTGLELGSKLDKAEEIKAELERLRRLKEQEKIAAHFRTSGTILASMSLPHFLRGDGIMRGMAMASEVQSQLSKRNTFAIGGNLAVNGNAGGGAATALFRHEISEVSSVEFMASAGLRSLIGVQTSRQLSVHSAATMGVAMSLQDGSLNLSNSWTRQLSETARGHIQLALGSQSSIAVGWQKKDERRSASGEVKFGTSLIDVTAHYTHRFSSKSHGRIGGRVGSSALEIEIGGGRKLSKFSTVRWLYTIGMQGIIWKFELHRGGQKLIIPILLTRHLNPIFAGGAFFIPASLYFLLKKFLIKPYYLRRNKQKGLENAEKTSAQVQEAKATAEKAQQLQQTVANRKRNKQLETGGLVITRALYGNQVVLNKINTSSETSHESTSEVIDVTIPLNFLVSDSGQLKLHEGVKKSGIMGFCDPCPGEPKTLYVEYSYAGKQYKVLVGDYEDLLIPQGAHRI 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1093 540 SMART dnaj_3 11 72 IPR001623 -
Bisa01g1093 540 Coils Coil 90 117 - -
Bisa01g1093 540 PANTHER CHAPERONE PROTEIN DNAJ 13 1 540 IPR042162 -
Bisa01g1093 540 PRINTS DnaJ domain signature 72 91 IPR001623 -
Bisa01g1093 540 PRINTS DnaJ domain signature 52 72 IPR001623 -
Bisa01g1093 540 PRINTS DnaJ domain signature 14 32 IPR001623 -
Bisa01g1093 540 PRINTS DnaJ domain signature 32 47 IPR001623 -
Bisa01g1093 540 Gene3D DnaJ domain 7 101 IPR036869 -
Bisa01g1093 540 Pfam DnaJ-like protein C11, C-terminal 386 534 IPR024586 -
Bisa01g1093 540 Coils Coil 397 430 - -
Bisa01g1093 540 CDD DnaJ 12 69 IPR001623 -
Bisa01g1093 540 Pfam DnaJ domain 13 77 IPR001623 -
Bisa01g1093 540 SUPERFAMILY Chaperone J-domain 9 83 IPR036869 -
Bisa01g1093 540 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Bisa01g1093 540 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1093 Bisa-ChrBisa01 18234968 18255012 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1093 14 79 C2H2 Transcription Factor Family AT1G74250 45.588 3.29e-08 54.3