Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1082 ATGGCACCCACAAGCAAGAAGAGTGAGCCTCCCACTAAGAAAATCATGAACAGAGGAGCTTGGACTCCTGAAGAAGACCAGAAGCTAGCTCGCTGCATTCAAATTCATGGGGCTAAAAGGTGGAAGACCATTTCTGTCAAGTCGGGTCTTAACAGATGTGGCAAGAGTTGCAGACTGCGATGGCTGAACTATCTCAGACCCAATATCAAGAGAGGAAACATATCTCATGAAGAAGAAGATTTGATTCTCAGGCTTCACAAACTCCTCGGAAACAGGTGGTCATTGATAGCTGGTAGGCTTCCAGGACGAACAGACAATGAAATTAAGAACTACTGGAATTCTCACTTGTGTAAAAAGGTGAATCCCAAGGAGAAAAAATCAGAAGCTTCAACCCCACAAGAAAGCACGCCCCAGAACACCTGGGATAATGCTGTTGTGGAGAATGAGGATGTTGTTCATGGAAATGTAGGTGGGAATTCAGAAGTTAGCTTCGATGTGAATGAGTTCTTCGACTTCTCCACTGAAGAAGGATCCTATGAGTTGGATTGGGTGAGCAAGTATTTACAACTTGATGAATTTCCTGAAAGATTTGTCTATATGAGGATTAAAGAGACCAGTAAATGGATGAGTCCCTCTTCAGGGCAAGAAATCATCTTGAATTACTCAGGAAAAATGCCTTTTCCATAA 687 0.4279 MAPTSKKSEPPTKKIMNRGAWTPEEDQKLARCIQIHGAKRWKTISVKSGLNRCGKSCRLRWLNYLRPNIKRGNISHEEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLCKKVNPKEKKSEASTPQESTPQNTWDNAVVENEDVVHGNVGGNSEVSFDVNEFFDFSTEEGSYELDWVSKYLQLDEFPERFVYMRIKETSKWMSPSSGQEIILNYSGKMPFP 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1082 228 CDD SANT 20 65 IPR001005 -
Bisa01g1082 228 Gene3D - 12 71 - -
Bisa01g1082 228 FunFam MYB-related transcription factor 17 70 - -
Bisa01g1082 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 120 IPR017930 -
Bisa01g1082 228 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 12 144 - -
Bisa01g1082 228 ProSiteProfiles Myb-like domain profile. 66 116 IPR001005 -
Bisa01g1082 228 Gene3D - 75 145 - -
Bisa01g1082 228 Pfam Myb-like DNA-binding domain 18 65 IPR001005 -
Bisa01g1082 228 Pfam Myb-like DNA-binding domain 71 116 IPR001005 -
Bisa01g1082 228 SMART sant 17 67 IPR001005 -
Bisa01g1082 228 SMART sant 70 118 IPR001005 -
Bisa01g1082 228 FunFam Transcription factor TT2 74 144 - -
Bisa01g1082 228 CDD SANT 75 116 IPR001005 -
Bisa01g1082 228 SUPERFAMILY Homeodomain-like 17 112 IPR009057 -
Bisa01g1082 228 ProSiteProfiles Myb-like domain profile. 13 65 IPR001005 -
Bisa01g1082 228 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 13 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1082 Bisa-ChrBisa01 18115108 18116496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1082 3 120 MYB Transcription Factor Family AT3G13540 65.546 8.30e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa01g1082 Myb_DNA-binding 1.9e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1157 11 29747265 29748083 Bisa01g1082 01 18115108 18116496 CCT