Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1081 ATGGAACAAGAATCTCTCCTTCTTCACACTCAGCTCCGTCTGCAACCTCCAGAGGAATTATCCATTAATGAAAACGACAAAGCTCAAGAATGCACAGAAATCAACCACAAGAAGCCCAAGAAGAGACACGTGGACGGCAGGCACCCTACGTATCGCGGTGTTCGCATGCGTCAATGGGGAAAATGGGTTTCAGAAATCAGAGAGCCCAAGAAGAAATCCAGAATCTGGCTCGGCACTTTCCCCACTCCGGAGATGGCGGCTCGAGCTCACGACGTGGCGGCTCTCGCGATTAAAGGCACCTCGGCTTTCCTTAATTTCCCGGAGATAGCCGCCCAGCTCCCGCGCCCCGCCACGGCTTCCCCCAAGGACATCCAAGCCGCGGCGGCCAAGGCGGCCGCTATTAGCTACCAGAGGAGCCGCGATGCCGTGGAAGCCGAGTCGAAGGAGAGCCGAGCGGATGCTCGGGGTTCGTCGAATTCGCCGTTAACGGACGACGACGATACGTTCTTCGACCTCCCTGATCTGTTAAATGACGGCGTCGATGAGTTTCAGTACTCCTCGCTGTGGCTCCTAGCCGGAGCTGAAGAACCGTTTCTGTGGGACTCTTACTAG 612 0.5621 MEQESLLLHTQLRLQPPEELSINENDKAQECTEINHKKPKKRHVDGRHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAALAIKGTSAFLNFPEIAAQLPRPATASPKDIQAAAAKAAAISYQRSRDAVEAESKESRADARGSSNSPLTDDDDTFFDLPDLLNDGVDEFQYSSLWLLAGAEEPFLWDSY 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1081 203 SMART rav1_2 50 113 IPR001471 GO:0003700|GO:0006355
Bisa01g1081 203 MobiDBLite consensus disorder prediction 23 39 - -
Bisa01g1081 203 CDD AP2 51 108 IPR001471 GO:0003700|GO:0006355
Bisa01g1081 203 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 35 177 - -
Bisa01g1081 203 Gene3D AP2/ERF domain 50 109 IPR036955 GO:0003700|GO:0006355
Bisa01g1081 203 MobiDBLite consensus disorder prediction 17 48 - -
Bisa01g1081 203 SUPERFAMILY DNA-binding domain 50 107 IPR016177 GO:0003677
Bisa01g1081 203 PRINTS Ethylene responsive element binding protein signature 73 89 IPR001471 GO:0003700|GO:0006355
Bisa01g1081 203 PRINTS Ethylene responsive element binding protein signature 51 62 IPR001471 GO:0003700|GO:0006355
Bisa01g1081 203 MobiDBLite consensus disorder prediction 140 167 - -
Bisa01g1081 203 ProSiteProfiles AP2/ERF domain profile. 50 107 IPR001471 GO:0003700|GO:0006355
Bisa01g1081 203 Pfam AP2 domain 49 99 IPR001471 GO:0003700|GO:0006355
Bisa01g1081 203 FunFam Ethylene-responsive transcription factor 2 49 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1081 Bisa-ChrBisa01 18077309 18077920 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1081 40 199 AP2-EREBP Transcription Factor Family AT2G44940 51.691 4.85e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g1081 AP2 1.5e-13 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1159 11 29814884 29815426 Bisa01g1081 01 18077309 18077920 CCT