Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1071 ATGCATATAGAGGAATTGAAGGGAGGGGTGGTAGAGGGTGGAGAGGAAGAAAAATCAAATTTCAGGGATGGTGTTATCAGCGGGGCAAGTTTAGTTGTAACTGATGCGAAAAGGGTTCTGGTTGGAGCAGGGGCTCGTGCGCTCTTCTATCCCACTCTGCTTTACAATGTCCTTAGAAATAAGTTTCAGGCCGAATTTCGGTGGTGGGATAAAGTTGACGAGTTTGTATTATTAGGTGCTGTTCCATTCCCTATTGATGTTCCTCACCTAAAGGAGCTTGGCGTTCGTGGAGTGATCACATTGAATGAGCCATATGAGACTCTGGTTCCAACCACACTATATCATGCTCACGGAATTGACCATCTGGTTATTCCTACAAGAGATTACTGCTTTGCACCATCATTACGTGATATATGCACTGCTGTGGACTTCATACATGAGAATGCATTGTCTGGGCGAACTACATATGTCCACTGCAAAGCTGGGCGTGGTCGCAGCACAACTATTGTTATCTGTTACCTGGTGCATCACAAGATGATGACACCTGATGCTGCATATGATTATATAAAGTCAATTCGGCCAAGGGTTCTTCTAGCTTCTTCTCAATGGCAAGCTGTTCAGGAATACTACCACCTGCTGGTGAAGAGGACCGTTGCCTATGCTCCCACAGCCAATTTATTAGTGAAAGCATCTAAGGCTGCAGCAGCTTCAAAAGACCTTGTAACATTTGACGATGGTTCTGTAGTTGTGGTGACACAGTCAGATCTTGAAGGATACGACCCAAGCATCCAATCAGGTGCTGTGTCAAGTGAGATATGGGCAGATCTAAGCGTTGTTTACCGCGTTCGAGTCGCTGGGCAGGCAGCATTGGCAGGAATATCATGGCTTAGGCTTCGATATTTCTCACAACCAAAGATTTCTGGAAACCAAATGAGCAGGGAGAACAGCTGCACGATCAGAACTGATCACTTGGGAGGCATCAGCGTTGATATCCATGTGTACTAA 1005 0.4567 MHIEELKGGVVEGGEEEKSNFRDGVISGASLVVTDAKRVLVGAGARALFYPTLLYNVLRNKFQAEFRWWDKVDEFVLLGAVPFPIDVPHLKELGVRGVITLNEPYETLVPTTLYHAHGIDHLVIPTRDYCFAPSLRDICTAVDFIHENALSGRTTYVHCKAGRGRSTTIVICYLVHHKMMTPDAAYDYIKSIRPRVLLASSQWQAVQEYYHLLVKRTVAYAPTANLLVKASKAAAASKDLVTFDDGSVVVVTQSDLEGYDPSIQSGAVSSEIWADLSVVYRVRVAGQAALAGISWLRLRYFSQPKISGNQMSRENSCTIRTDHLGGISVDIHVY 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1071 334 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 63 215 IPR029021 -
Bisa01g1071 334 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 286 - -
Bisa01g1071 334 CDD PTPMT1 68 210 IPR044596 GO:0004721
Bisa01g1071 334 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Bisa01g1071 334 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Bisa01g1071 334 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Bisa01g1071 334 SMART ptp_7 110 221 IPR003595 -
Bisa01g1071 334 Gene3D Protein tyrosine phosphatase superfamily 68 218 IPR029021 -
Bisa01g1071 334 FunFam Dual specificity phosphatase domain protein 68 215 - -
Bisa01g1071 334 Pfam Dual specificity phosphatase, catalytic domain 91 210 IPR000340 GO:0008138|GO:0016311
Bisa01g1071 334 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1071 Bisa-ChrBisa01 17916334 17920808 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1071 1 334 Protein tyrosine phosphatase (PTP) family AT2G35680 58.621 1.21e-133 382