Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1066 ATGGCTACCTCGCCCATCTCCTCTTATTCTTCAGAAAGGTTCAGAAATTCCTCTTTCTTCTTCTTCTTCAGAAGATTTACTACAGAAAATAGTTTGATTTCATTTGAAGTCATAGTCATGGCGAACCCTGTTGAACTTTCAGCCCTTAATCGTATAAAATTGCATCTTCTAGGCGAACTGTCTCCACTGGGGACTTTCTCCAGTGGCCTTAGCAGCTCAGCTAGCGATGCTACGCAGCGACTCTGGTTTGGTGAAGCAAACTCAACCATTTCCAGTTCTGAATCTGAATCTCTCTGTTCCCAATCATCGAGTTCTGACTCTGCCATCACGGTCTCCGATTACTTCACCGAACCCTTCGATTTCCCAACCAACTCCGTAAATCTATTTGAACCTGAGTCCAAAAACCAAGTAATCGACCTCTCAACACCCAAATCCGAACCCGAAACTTCGCAATTCGACACCAGTTTTTCCAAATTCGAATCCAACTCACAGTCCAGCAATTGCACGTTCGAGTTTCAAACTAGGCCTCAACCCGCAGAGAAAAAAGCTCAACTAAATCGCAAACCATCGTTACAAATCTCGCTCCCGAAGAAGACCGAGTGGATCCAATTTGGAAACCCGGCTCAACAACAGGAGTTTCCAGAAGTCGTCGTGAAGAAAGATTCAAACACTGGAGAGAAAAAGCATTACCGGGGCGTCCGACAGCGGCCGTGGGGCAAGTTCGCCGCTGAGATTCGTGACCCGAACAAGCGTGGATCTAGGGTTTGGCTGGGAACATTTGATACGGCTATCGAAGCCGCCAAAGCCTACGACCGTACTGCCTTTAAGCTCCGTGGCTCCAAAGCCATACTCAATTTCCCCCTGGAAGCAGGGACATCCAGCTTCGAGGCCGGCGCGGAGGAGAGAAAACGCCGGCGAGAAGATGAGACGGAAGTAGAAGTAAAGGCATGGGCGAAGAAGGAGAAAACGACGGAACCCGACGTGATAAGTATAAAGGACATTCCGTTAACGCCGTCTAGTTGGTCAGGGTTCTGGGACAATGATTTAAAGGACATTATCACGGTGCCGCTGTTGTCACCGTTATCTCCCTATCCACTGGGTTATCCACAACTTATGGTTGCATGA 1125 0.4818 MATSPISSYSSERFRNSSFFFFFRRFTTENSLISFEVIVMANPVELSALNRIKLHLLGELSPLGTFSSGLSSSASDATQRLWFGEANSTISSSESESLCSQSSSSDSAITVSDYFTEPFDFPTNSVNLFEPESKNQVIDLSTPKSEPETSQFDTSFSKFESNSQSSNCTFEFQTRPQPAEKKAQLNRKPSLQISLPKKTEWIQFGNPAQQQEFPEVVVKKDSNTGEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAAKAYDRTAFKLRGSKAILNFPLEAGTSSFEAGAEERKRRREDETEVEVKAWAKKEKTTEPDVISIKDIPLTPSSWSGFWDNDLKDIITVPLLSPLSPYPLGYPQLMVA 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1066 374 ProSiteProfiles AP2/ERF domain profile. 229 287 IPR001471 GO:0003700|GO:0006355
Bisa01g1066 374 Pfam AP2 domain 229 279 IPR001471 GO:0003700|GO:0006355
Bisa01g1066 374 FunFam Ethylene-responsive transcription factor 2 228 289 - -
Bisa01g1066 374 Gene3D AP2/ERF domain 228 289 IPR036955 GO:0003700|GO:0006355
Bisa01g1066 374 SUPERFAMILY DNA-binding domain 229 288 IPR016177 GO:0003677
Bisa01g1066 374 PRINTS Ethylene responsive element binding protein signature 230 241 IPR001471 GO:0003700|GO:0006355
Bisa01g1066 374 PRINTS Ethylene responsive element binding protein signature 253 269 IPR001471 GO:0003700|GO:0006355
Bisa01g1066 374 PANTHER DNA-BINDING DOMAIN 167 304 IPR044808 GO:0003700|GO:0009873
Bisa01g1066 374 CDD AP2 228 287 IPR001471 GO:0003700|GO:0006355
Bisa01g1066 374 SMART rav1_2 229 293 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1066 Bisa-ChrBisa01 17852074 17853353 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1066 40 374 AP2-EREBP Transcription Factor Family AT5G47230 46.199 1.78e-66 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g1066 AP2 1.9e-15 CL0081