Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1063 ATGTACGGGCAGGCGACTTACGAGTCCGATTTAGCCGTGCTGGAGTCTATTCGACTTCACTTGCTCGGAGACTCCGAAACCCGTTTCGCAGTTCCGGTGACTTCTTCTGGTACTGGTCCGGTTTGCACTCGGAGCTCCAGTTTCAGCAGCTTGTACTCGTGCTTGACGGACAATTGGGGCGATTTGCCACTCAAAGAGGACGATTCGGAGGACATGGTGCTTTACGGCGTCCTCCGCGACGCGGTCAACGTCGGATGGGTCCCTTCCCTTGATGCGGGTTCACCCGAGAGCGTCTCGTCGGGGTTTGACCCCACCCATATTACGGTCAAATCGGAGCCCGATGTTATGCCGGCGATGGCCCATAGCCCCCACGAGGAGTCCCCGGTGGTCCCTCCGGTGATTCCGCAAGAGAAGGTCCCAGCCGCTCCGGCTGCGTTCCCGGCGAAGGGGAAGCATTACCGAGGCGTACGACAGCGGCCGTGGGGGAAATTCGCGGCTGAGATCCGTGACCCGGCTAAAAACGGAGCCCGGGTCTGGCTCGGAACATTCGAGACGGCGGAGAACGCGGCGTTGGCTTACGATCGAGCGGCGTACCGGATGCGTGGGTCGCGGGCTCTGCTGAATTTCCCTCTGCGAGTGAATTCGGGCGAACCCGACCCGGTGAGAGTGACGTCCAAGAGGTCTTCGTCGGAGCTATCGTCGTCGGAGATCGGCGCGTCGCCGAAGAGGAGGAAGAAGGTGGTGGTGGAGCCAAATTCGAAGGCAAGTACGGTGGTGACAGCGCAAGTGGAATTGAAAACAGGGCAAGTGGGAAGCCAAGTGGGAGCAACGTCGTATGTACGTGGCGAGCAGTTGTTGGTTAGCTAA 867 0.5986 MYGQATYESDLAVLESIRLHLLGDSETRFAVPVTSSGTGPVCTRSSSFSSLYSCLTDNWGDLPLKEDDSEDMVLYGVLRDAVNVGWVPSLDAGSPESVSSGFDPTHITVKSEPDVMPAMAHSPHEESPVVPPVIPQEKVPAAPAAFPAKGKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAENAALAYDRAAYRMRGSRALLNFPLRVNSGEPDPVRVTSKRSSSELSSSEIGASPKRRKKVVVEPNSKASTVVTAQVELKTGQVGSQVGATSYVRGEQLLVS 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1063 288 Pfam AP2 domain 152 202 IPR001471 GO:0003700|GO:0006355
Bisa01g1063 288 PANTHER DNA-BINDING DOMAIN 128 245 IPR044808 GO:0003700|GO:0009873
Bisa01g1063 288 PRINTS Ethylene responsive element binding protein signature 176 192 IPR001471 GO:0003700|GO:0006355
Bisa01g1063 288 PRINTS Ethylene responsive element binding protein signature 153 164 IPR001471 GO:0003700|GO:0006355
Bisa01g1063 288 MobiDBLite consensus disorder prediction 218 253 - -
Bisa01g1063 288 FunFam Ethylene-responsive transcription factor 2 151 211 - -
Bisa01g1063 288 SUPERFAMILY DNA-binding domain 152 212 IPR016177 GO:0003677
Bisa01g1063 288 Gene3D AP2/ERF domain 151 213 IPR036955 GO:0003700|GO:0006355
Bisa01g1063 288 SMART rav1_2 152 216 IPR001471 GO:0003700|GO:0006355
Bisa01g1063 288 CDD AP2 151 210 IPR001471 GO:0003700|GO:0006355
Bisa01g1063 288 MobiDBLite consensus disorder prediction 221 237 - -
Bisa01g1063 288 ProSiteProfiles AP2/ERF domain profile. 152 210 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1063 Bisa-ChrBisa01 17813429 17814295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1063 1 268 AP2-EREBP Transcription Factor Family AT4G17500 53.047 3.75e-81 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g1063 AP2 1.5e-14 CL0081