Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1039 ATGGTTAAGCAAGGGCCTTGCTATCACTGTGGAGTTACAAACACACCACTTTGGCGCAATGGGCCACCAGAGAAGCCAGTGCTATGCAATGCATGTGGATCTCGATGGAGGACAAAGGGAACACTTGCAAATTATACCCCTTTACATGCCCGGGCAGAAACTGATGATTATGAGGATCAAAGGCTTTCCCGGGCTAAGAGCATATCATTAAATAAGAACAAAGAAGTGAAATTGCTCAAACGAAAGCAGAACCATGATAATCTATTATCTGGATGGGTTGCACCTGATTACAATCAGGGATTCCGAAAGGTGACAGATGAAGATACAAGCAATAGATCAAGCTCAGGATCAGCTATCTCTAACTCGGAGAGCTGCGCTCAATTTGCTGGGGCAGATGCTAGTGATTTGACAGGTCCTGCTCAGTCAGTTGTGTGGGATGCCACAGTGCCTTCAAAAAAGAGGACATGTGTTAGCCGCCAAAAACCATCTTCTGTTGAGAAGCTCACAAAAGATTTATATACTATTCTTCATGAGCAACAGTCCTATTTCTCTGCATCTTCTGAAGAGGATCTTCTTTTTGAAAGTGAAACACCAATGGTCTCCGTTGAGATAGGACATGGAAGTGTACTCATCAGGCATCCTAGCTCTATAGCTCGTGAAGAGGAATCTGAGGCTAGCTCCCTTTCAGTCGATAACAAACAGTGCCCAACAAGTGAGGCATATTCATGCTCTGGTGCCATTCGTATGTATAATGATTTCAAGGGCAAGAACCTTCCATCTCAGGGAGTTGAAAAAGTCAAGTACTATGATGGCCAAGGAATTCAGCAGGAGAAACTTAATAGGGACAAGTTTCAGCAAGAAAGCTTACAAATCCTTGGATACCATAATTCACCACTCTGCTTAGTAGATTTAAATGATGTTGTAAACTATGAGGTGTTTATAAGGAACTTGACAAATGAAGAGCAGCAGCAATTACTGAAGTGTCTCCCAGTGGCTGATACTGCTAAATTTTATGACAGCCTCAAGAGCATGTTCGATAGCCCTCAATTTAAGGAGAACTTATCTTACTTTCAATGGCTTCTTGGGGAAGGTGTCTTCGATATATCTTTATCTGGGGTAAAACCTGAAGGATGCAAGACTTTGAAACGGCTTGCACTATCTGATCTGTCACAGTCAAAATGGGTTGAACAATATGATTTACTGAAGATATGTAAATACGGAGCTGAAAAACCTGTTGGTTCCGGACCAACTGGCATGGTGTCAATTAATGTTGCCAATGGGAGGAGATTGCGTGACAACCCAAAACAAAATATTCCTGAACTGAAGACAACAGTTAGGAGCCCCAAAAGGGTGACCATGAAAGCTAGCTGTGATGGCAAGGAAGTTTTAGAGGATGGCTCTTGCTTCAGCCCAAAAAGCCTGTTTGCTTTGCCTCCTGATGGTAGCTCGCTTATGCTGGATTCTTTCAACTTTGGTGAGGAGAGTTCTGATCAGGATCTGCTGCTTGAAGTGCGATCAAACAGTTCTTTCCCACAGGCAGAGCTACTGCACCCAACTTTAAGCTTTGGTGCTCAAGCCAGCACCAGTAGTAGCTCAATATACCCACATCTTGCCCATCTCTGA 1623 0.4344 MVKQGPCYHCGVTNTPLWRNGPPEKPVLCNACGSRWRTKGTLANYTPLHARAETDDYEDQRLSRAKSISLNKNKEVKLLKRKQNHDNLLSGWVAPDYNQGFRKVTDEDTSNRSSSGSAISNSESCAQFAGADASDLTGPAQSVVWDATVPSKKRTCVSRQKPSSVEKLTKDLYTILHEQQSYFSASSEEDLLFESETPMVSVEIGHGSVLIRHPSSIAREEESEASSLSVDNKQCPTSEAYSCSGAIRMYNDFKGKNLPSQGVEKVKYYDGQGIQQEKLNRDKFQQESLQILGYHNSPLCLVDLNDVVNYEVFIRNLTNEEQQQLLKCLPVADTAKFYDSLKSMFDSPQFKENLSYFQWLLGEGVFDISLSGVKPEGCKTLKRLALSDLSQSKWVEQYDLLKICKYGAEKPVGSGPTGMVSINVANGRRLRDNPKQNIPELKTTVRSPKRVTMKASCDGKEVLEDGSCFSPKSLFALPPDGSSLMLDSFNFGEESSDQDLLLEVRSNSSFPQAELLHPTLSFGAQASTSSSSIYPHLAHL 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1039 540 Gene3D - 295 387 IPR038108 -
Bisa01g1039 540 Gene3D - 3 86 IPR013088 GO:0006355|GO:0008270
Bisa01g1039 540 FunFam GATA transcription factor 27 3 85 - -
Bisa01g1039 540 ProSitePatterns GATA-type zinc finger domain. 7 32 IPR000679 GO:0006355|GO:0043565
Bisa01g1039 540 PANTHER OSJNBB0038F03.10 PROTEIN 7 536 IPR044589 -
Bisa01g1039 540 SMART GATA_3 1 55 IPR000679 GO:0006355|GO:0043565
Bisa01g1039 540 ProSiteProfiles GATA-type zinc finger domain profile. 7 40 IPR000679 GO:0006355|GO:0043565
Bisa01g1039 540 Pfam GATA zinc finger 7 41 IPR000679 GO:0006355|GO:0043565
Bisa01g1039 540 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 45 - -
Bisa01g1039 540 CDD ZnF_GATA 6 53 IPR000679 GO:0006355|GO:0043565
Bisa01g1039 540 ProSiteProfiles DEUBAD (DEUBiquitinase ADaptor) domain profile. 295 406 IPR044867 -
Bisa01g1039 540 Pfam Asx homology domain 287 367 IPR028020 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1039 Bisa-ChrBisa01 17527256 17532774 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1039 1 517 C2C2-Gata Transcription Factor Family AT4G17570 54.562 7.14e-159 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bisa01g1039 ASXH 9.1e-07 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa11g1202 11 30489791 30496007 Bisa01g1039 01 17527256 17532774 CCT