Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1035 ATGGCCAACCCATCTTCCTCGGCTTCCGGGCAGGGCATCTACTCTGACGCCTCCTACTTTCCCATGCCTTTCCATCTTCAGCAGCCTCCATCGACGGCGCCGCCACACTCAGGGTACACGGCGGCGCCCTCGGCTGTGCAAATCCCCCCTCCCTCTGCAGTCCCCACGGGCGTATACACTTTCCCGCAGTATCAGCAGGCGCAGCAGCTATTTCGAAGGGATGCGCAAACCATCACACCCGAAGCTCTCGAGAACGTCAAAGCGGCTATTGCTAATAGCGAGATCGAGCACAGAGCAGATACCAAAAAGAAAGCGATTCCTCGTAAAGCTGCTGGGCAATCGTGGGAGGATCCGTCGCTTGCAGAGTGGCCGGAGAATGACCACCGGCTGTTTTGCGGGGATCTGGGGAACGAGGTGAACGATGATGTCCTTTCAAAAGCGTTTTCGAAGTTTCCGTCGTTTAACATGGCAAGGGTTGTTAGAGATAAGCGGAGTGGGAAGACGAAAGGATACGGCTTTGTTAGCTTCGCTGATATTTCTGACCTTGCTGTTGCTCTTAAAGAGATGAATGGTAAATATGTAGGAAATCGGCCTATCAAACTTTGCAAAAGTAAGTGGAAGGAGAGAACAGATTATGATGCCATGGGGAAACAGAAGAAACAATCTCGGAAGAAATCGAAACCGTCAAAGATAGGCGTATTGCATTACTGA 711 0.5148 MANPSSSASGQGIYSDASYFPMPFHLQQPPSTAPPHSGYTAAPSAVQIPPPSAVPTGVYTFPQYQQAQQLFRRDAQTITPEALENVKAAIANSEIEHRADTKKKAIPRKAAGQSWEDPSLAEWPENDHRLFCGDLGNEVNDDVLSKAFSKFPSFNMARVVRDKRSGKTKGYGFVSFADISDLAVALKEMNGKYVGNRPIKLCKSKWKERTDYDAMGKQKKQSRKKSKPSKIGVLHY 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1035 236 MobiDBLite consensus disorder prediction 210 236 - -
Bisa01g1035 236 MobiDBLite consensus disorder prediction 220 236 - -
Bisa01g1035 236 Gene3D - 73 226 IPR012677 -
Bisa01g1035 236 FunFam RNA-binding protein 42 63 213 - -
Bisa01g1035 236 SMART rrm1_1 129 202 IPR000504 GO:0003723
Bisa01g1035 236 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 130 200 IPR000504 GO:0003723
Bisa01g1035 236 CDD RRM_RBM42 122 204 IPR034215 -
Bisa01g1035 236 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 128 206 IPR000504 GO:0003723
Bisa01g1035 236 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 57 221 - -
Bisa01g1035 236 MobiDBLite consensus disorder prediction 98 119 - -
Bisa01g1035 236 MobiDBLite consensus disorder prediction 24 43 - -
Bisa01g1035 236 SUPERFAMILY RNA-binding domain, RBD 111 209 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1035 Bisa-ChrBisa01 17514685 17515395 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1035 130 208 Eukaryotic Initiation Factors Gene Family AT2G23350 37.975 6.25e-11 60.1