Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g1005 ATGGCCACTTTCTGCAGCTTCCTCTTTTGCTGCAGTGCTCTGCTTCTCGCTTCTCTGGCGGCCCCCTCCGTTCAAGGAGGCAAGTACGGCGGCGCCGCCGTAGACGAGGCGGAGGGGGACAGAGTGAGGAACTTACCGGGGCAGCCGCCGGTGAAATTCAGACACTACGCTGGTTATGTGAAGCTGAATCCTCACTCACAGAAGGCATTGTTCTACTGGTTCTTCGAAGCTCAAGAAACACCGTCACAGAAGCCTCTCGTGCTTTGGCTCAATGGAGGACCTGGATGCTCATCCGTTGGTTATGGAGCTGCGCAAGAACTTGGCCCATTTATTGTTCAAAAAAACGAGAGGCTCGCACTCAACAAATTCTCATGGAACGAAGTTGCAAATGTACTGTTCTTGGAGTCCCCAGTTGGCGTGGGATTTTCCTACACAAACAACTCAGAAGACTTGAGAGAGCTTGGTGATGGAGTTACTGCCCTTGATAACTATGCCTTCCTAATCCAATGGTTCAAACGGTTCCCAAGCTACAGATCCCACGACTTTTATATCACTGGAGAGAGCTATGCCGGACATTATGTTCCACAGCTAGCTGAGGTCATCTATGAAGGAAACAAAGATACCAGGAAGGGCTCCTACATAAATCTCAAGGGATTCATGATTGGGAACGCTGTGGTAAATGATGAATCAGACACAAAAGGGTTTATAGACTATGCTTGGAGCCATGCCGTAATCTCAGATCAGGTCTACCATGGAATAACCACAGAATGTGATTTCAGCAATGAGAAATCAACAAAAGATTGTGATTTCCATTTTAGAGAGTTATTTAGAGCTTACTCTGAAATTGACATATATGGCATTTATTCACCCATTTGCCTCTCTGCTTTTAACAAAGCAGTTTCTTCCAAACTTGTGGTTGCCCCTCATCTTCTCACAAAACATGAGCTATGGCAAGAGGTACCATCAGGACACGATCCATGCACAGAGGATTATGTTGCCAGATATTTTAACAGACAAGATGTTCAAAAGGCCCTACATGCCAATCTCACCAACTTGTCCTATCCTTATACTCTTTGCAGTGTTGTAATTGAGAAATGGAATGACTCAGCAAGCACAGTTCTGCCTATCATTCAGAAGCTCTTAAATGCTGGTTTACGCATCTGGATCTACAGTGGGGACACAGATGGGAGAGTTCCAGTGACATCAACAAGATACAGCATAAATAAAATGGGTTTGAAAATAAAGGGAAATTGGAGTGCTTGGTTTCACGACCATCAAGTGGGAGGATGGAAACAAGAGTATGAAGGTGGACTCACTTTTGTGACCATAAGAGGAGCTGGCCACCAGGTTCCCATCTTTGCTCCCCAACAATCCCTTTCTCTTGTCTCTCACTTCCTCTCTTCTCAATCCTTGCCTTCTTCTCGCTTTTAG 1431 0.4563 MATFCSFLFCCSALLLASLAAPSVQGGKYGGAAVDEAEGDRVRNLPGQPPVKFRHYAGYVKLNPHSQKALFYWFFEAQETPSQKPLVLWLNGGPGCSSVGYGAAQELGPFIVQKNERLALNKFSWNEVANVLFLESPVGVGFSYTNNSEDLRELGDGVTALDNYAFLIQWFKRFPSYRSHDFYITGESYAGHYVPQLAEVIYEGNKDTRKGSYINLKGFMIGNAVVNDESDTKGFIDYAWSHAVISDQVYHGITTECDFSNEKSTKDCDFHFRELFRAYSEIDIYGIYSPICLSAFNKAVSSKLVVAPHLLTKHELWQEVPSGHDPCTEDYVARYFNRQDVQKALHANLTNLSYPYTLCSVVIEKWNDSASTVLPIIQKLLNAGLRIWIYSGDTDGRVPVTSTRYSINKMGLKIKGNWSAWFHDHQVGGWKQEYEGGLTFVTIRGAGHQVPIFAPQQSLSLVSHFLSSQSLPSSRF 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g1005 476 Pfam Serine carboxypeptidase 46 467 IPR001563 GO:0004185|GO:0006508
Bisa01g1005 476 Gene3D alpha/beta hydrolase 36 294 IPR029058 -
Bisa01g1005 476 SUPERFAMILY alpha/beta-Hydrolases 38 473 IPR029058 -
Bisa01g1005 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 438 451 IPR001563 GO:0004185|GO:0006508
Bisa01g1005 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 134 144 IPR001563 GO:0004185|GO:0006508
Bisa01g1005 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 121 133 IPR001563 GO:0004185|GO:0006508
Bisa01g1005 476 PRINTS Carboxypeptidase C serine protease (S10) family signature 170 195 IPR001563 GO:0004185|GO:0006508
Bisa01g1005 476 ProSitePatterns Serine carboxypeptidases, histidine active site. 438 455 IPR033124 GO:0004185
Bisa01g1005 476 FunFam Carboxypeptidase 373 468 - -
Bisa01g1005 476 ProSitePatterns Serine carboxypeptidases, serine active site. 184 191 IPR018202 GO:0004185
Bisa01g1005 476 FunFam Carboxypeptidase 36 294 - -
Bisa01g1005 476 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 42 455 IPR001563 GO:0004185|GO:0006508
Bisa01g1005 476 FunFam Carboxypeptidase 324 471 - -
Bisa01g1005 476 Gene3D - 373 467 - -
Bisa01g1005 476 Gene3D - 327 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g1005 Bisa-ChrBisa01 16972764 16981192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g1005 332 471 Calmodulin-binding Proteins AT2G22960 28.369 8.41e-12 62.4