Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0977 ATGAGTACTCGGGCACCCAGGGGAGCAGCTGTCAGAAGTTACCGGAGGAGGAAGACAGCTTTGGACTTGGACCTTAATCGTGTCCCTCCTGGTGAGAATCGGGAGCAGGGTGGACCTTCAACACAGGAGGGGCCTCAAGAAGTTCAAGCTAGCCATCAACCTGCGGTTGAACAACCTACAATGATTGATGTTGAGGCCATTGATGATGATGTTGTTGAATCATCCCCGAGGGCCTTTGCTGAGGCTAAAAACAACTCGAGAAGAAATCGTGGGAGGGCTATTGTTGATGTGGACTTGGATGACCGGAACAGGGTAACTAATAATAATCGCAACAAACGCAGAAGAGATTCTCCAAGCCAAACAATTATCAATTGTGATCTTTATATAAACTTGGAAGGCAGTAGTAGTTCTATGAGAGAAAATGTTTGGAAGCCACCAGAACCTCCAAAGGAGCCTGTCTTTAACTGTCCAATATGTATGGGTCCTCTGGTAGAAGAAATGTCAACAAGGTGTGGTCATATTTTTTGCAAGAGTTGCATTAAGGCTGCAATTAATGCACAGGGTAAATGTCCTACCTGTAGAAAAAAGGTTACTGGAAAAGAGCTCATAAGGGTTTTCCTCCCATCAACTAGTTGA 636 0.4497 MSTRAPRGAAVRSYRRRKTALDLDLNRVPPGENREQGGPSTQEGPQEVQASHQPAVEQPTMIDVEAIDDDVVESSPRAFAEAKNNSRRNRGRAIVDVDLDDRNRVTNNNRNKRRRDSPSQTIINCDLYINLEGSSSSMRENVWKPPEPPKEPVFNCPICMGPLVEEMSTRCGHIFCKSCIKAAINAQGKCPTCRKKVTGKELIRVFLPSTS 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0977 211 ProSiteProfiles Zinc finger RING-type profile. 156 194 IPR001841 -
Bisa01g0977 211 SMART ring_2 156 193 IPR001841 -
Bisa01g0977 211 MobiDBLite consensus disorder prediction 35 56 - -
Bisa01g0977 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 130 209 IPR013083 -
Bisa01g0977 211 Pfam Zinc finger, C3HC4 type (RING finger) 155 193 - -
Bisa01g0977 211 ProSitePatterns Zinc finger RING-type signature. 171 180 IPR017907 -
Bisa01g0977 211 PANTHER ELFLESS, ISOFORM B 1 211 - -
Bisa01g0977 211 MobiDBLite consensus disorder prediction 1 60 - -
Bisa01g0977 211 SUPERFAMILY RING/U-box 155 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0977 Bisa-ChrBisa01 16489586 16492344 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0977 4 210 C3H Transcription Factor Family AT5G48655 52.632 1.31e-53 169