Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0976 ATGGTAGTGATCATGCAGCAGCAGAATCCATCTGCACTGGTGCCGCAGCTCAACAATCCTCAGTCCTCCTCTGCCACCACCACATCCCTTAGGTCACCGCCTTCTGCAACACCGCCAAGTCAGTCCCAGCTATCTTCGCCGCTCCCTCTTGCTCCACTCTCCACTCCCCTCCGCCAAACTCTGCTGCCATCGCTGCCACCCGAACATGCTATTGGACCGGTGGTGCCCATCACTGCGGCACACCCATCCGGTGAGCCCGCTTTGACAGTGCCGCCTACCTGCCCGTTGCCCAGAGTCCGCCTCTCGGATATTGCCCAGTATGATGGAGCTCCAGCAGGGTCCTATGTGAGAGCAGTGGAAGCATTGTCTGGGTCTTTGATGAGGCATAATGCAGCGTTGATCGAATTGGGGACCGAGGATACAGCTCTGATGAGGTGCGGATTGGAAGGCTCGAGGTTGTTTTTCAGGAGCAGGGCCCATCTGGGTGTTGGGAAGGGCAGCCGTGGGGTTCACATGTACAGGGCAGGAAGGGCTTTGGAAGACTGGGATTCGTCTCCCCCATGCATGGCTGATATATTTAGGTGCATGGGAAAGGCAGCTCGTTCTGCTCTGTGTGCTATTGCTAGGCATCTCCGTCTTCGAAGCGATGTTTTTAACCATTTGCTTGATGATACTCCATTGCCTGCTAATGAGGTGTCCTCATCAGTTCTTGTTGCAACCTACTCACATGCTTCTTTGCCAAATGGAAAGGGTGCTATTGGAGGTGGTAAGCCAACCGTGAATGGTGAAGTTGAGAAAGGATTGTTGACATTGATATCTTCAGATTCTCCTGGTCTTCAGGTATGTGACCCAAATGGCCGCTGGTATCTGGCAGATAGTGGGTCTGGTCCTGGGGAACTTTTGCTGTTAACCGGCAAGGCACTTAGCCATGCTACTGCAGGCCTTCGTCCTGCTGCATCATATAGAGCTTCTCCTGATTATTTTCTAGGCACTAACAGTGGAGGAAGAACATCTCTTGCATTTAGACTCATGCCGCAGGGCAATGCTATATTGGATTGTTCTCCAATTGCGGCAGCTGGCCATGTTATTCCCCAAAGTTATGTTCCAATATCTGTTAGCCAGTTTATGGATGACCTTTCTGCTGAAGAAGAAGTAATAGGCAACCGGTCCTATAACACTATTGTTGCTGGAAACAATGTGAATAAGGAACAATCACTGAGAAGTGTTCTATCAGATCCTTTGACTGGCGCATTCCTAGAAGATGCCATGCTTGTCTCATGTGGGCATTCATTTGGTGGTCTCATGCTGAGGAGAGTCATTGAAACTTCAAGATGTACTCTCTGCAATGCAGATATTGAGACCGGTTCTTTGATCCCTAATTTTGCTCTAAGAGCTGCAGCCACAGCAGTCAAGCATGAGGATGATCGAAGGTTATTTCATAATGCTGTTCTCCGTAAGCGGCGGAAAGAAATGGGTGATCAAATGGATTCATTGAGAAGAACAAACAGGGAAAATGGAGATGTTACTGCTGATGATGGTCTTCACCGGGGGGTACAGTATCCATTTTCAGTTAATGAGAAGGTGATAATCAAGGGTAATAGGAGAACACCAGAAAAATTTGTTGGCAAAGAAGCTGTCATTACATCTCAGTGTCTTAATGGCTGGTACTTGCTCAAGATTATTGGAACTGGGGAGAACGTGCGCCTGCAATACCGTTCTCTTAGGAAGCTACTGAACTCACCAGCAATAGAGGATCAGTGTCCGTCACAGTCACAGCCAATTCAAAATAGCAGCTCTTAA 1800 0.4883 MVVIMQQQNPSALVPQLNNPQSSSATTTSLRSPPSATPPSQSQLSSPLPLAPLSTPLRQTLLPSLPPEHAIGPVVPITAAHPSGEPALTVPPTCPLPRVRLSDIAQYDGAPAGSYVRAVEALSGSLMRHNAALIELGTEDTALMRCGLEGSRLFFRSRAHLGVGKGSRGVHMYRAGRALEDWDSSPPCMADIFRCMGKAARSALCAIARHLRLRSDVFNHLLDDTPLPANEVSSSVLVATYSHASLPNGKGAIGGGKPTVNGEVEKGLLTLISSDSPGLQVCDPNGRWYLADSGSGPGELLLLTGKALSHATAGLRPAASYRASPDYFLGTNSGGRTSLAFRLMPQGNAILDCSPIAAAGHVIPQSYVPISVSQFMDDLSAEEEVIGNRSYNTIVAGNNVNKEQSLRSVLSDPLTGAFLEDAMLVSCGHSFGGLMLRRVIETSRCTLCNADIETGSLIPNFALRAAATAVKHEDDRRLFHNAVLRKRRKEMGDQMDSLRRTNRENGDVTADDGLHRGVQYPFSVNEKVIIKGNRRTPEKFVGKEAVITSQCLNGWYLLKIIGTGENVRLQYRSLRKLLNSPAIEDQCPSQSQPIQNSSS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0976 599 MobiDBLite consensus disorder prediction 1 53 - -
Bisa01g0976 599 SUPERFAMILY Clavaminate synthase-like 184 355 - -
Bisa01g0976 599 Coils Coil 481 501 - -
Bisa01g0976 599 Gene3D - 166 384 IPR027443 -
Bisa01g0976 599 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 398 471 IPR013083 -
Bisa01g0976 599 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 94 590 - -
Bisa01g0976 599 SUPERFAMILY RING/U-box 406 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0976 Bisa-ChrBisa01 16469946 16479816 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0976 406 582 Plant U-box Gene Family AT5G05230 41.899 1.53e-39 146