Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0955 ATGGCGGCTTCTTCCTCATCGCTTTTCGGAATCAGAGACGGCGATCAGAATCCGATGAACCCCCTCCATTCCCTCCCGCCGTCCTCCTCCACCGCCCCGACGGCGCCGCCACCCCCCAAGAAAAAACGTAACCAGCCCGGAACCCCAAATCCAGATGCGGAGGTGATAGCTTTGTCACCGAAGACGCTAATGGCGACAAACAGGTTCATCTGTGAAGTGTGCAACAAGGGGTTTCAGAGGGAGCAAAACCTTCAGCTTCACAGAAGAGGACACAACCTGCCATGGAAGCTGAAGCAGAAGAGTACGAAAGAACCAAGAAGAAAGGTGTATCTCTGTCCTGAGCCCACGTGCGTGCATCATGACCCTTCAAGGGCTCTCGGTGACCTCACGGGCATCAAGAAGCACTATTCTCGCAAGCATGGCGAGAAGAAGTGGAAGTGCGATAAGTGCTCTAAGAAGTATGCTGTTCAGTCCGATTGGAAGGCTCACTCTAAGACCTGTGGCACTAGAGAATATCGATGTGACTGTGGCACTCTCTTCTCCAGGAGGGACAGCTTCATCACCCACAGGGCCTTCTGTGACGCCTTGGCTCAAGAAAGTGCAAGACAACCACCCAACCTGAGCTCCGGTGGCCTCGGGAACCACCTCTTCGGAAGCAGTGGCGTGGTGGTCGGCGGCCCTCCTCCACCGCCCATCTCCGCCTTACATGAGCACCCCAACAACCACCTTCTCCCTCCATACATGTCCAGACCCATGTTCATCCCTGACTCAAACCAAACCTTATTCTCTCAACAACAAGGGTTGGTGCAACAACAAGACAAGCCCTTCAATGGAGGAGGCTTAATCCACTTGTCTCATGAACTTAATAACAACAACGGCAGCAATAATGTTAAAGATGACAACAGGACCACTAATCCTTCATCTGAAGCTAGTCTCTTCAACCTGCCATTCCTGTCCAACAACATCGGGAGTGGAGAAGCTGGAGGTGGTGGTATTATGGGAATGGGCTCTAATAATAATGCTTCTTCTCTTTTCAATATTCCTTCGCCTCAAATGTCTGCAACAGCATTGCTTCAAAAAGCTGCTCAAATGGGTGCAACTTCAAGTACCAACAACAACAATAACACAACTACTTCACTTCTCAGAACCTTCGGATCAACAACCTCGTCTTCAACCTCTGCGTCCAAATCTGCAACAAACTACAGCGCCATTTTCGGAGGAGCCCTTAACGTTAACGACGAACATGATCATCACAACAACAACCTCCAACACCTCATGAACTCATTTGCTGGGGAACCGCCGGCGCCGGCAGGCTGA 1317 0.511 MAASSSSLFGIRDGDQNPMNPLHSLPPSSSTAPTAPPPPKKKRNQPGTPNPDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEPRRKVYLCPEPTCVHHDPSRALGDLTGIKKHYSRKHGEKKWKCDKCSKKYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARQPPNLSSGGLGNHLFGSSGVVVGGPPPPPISALHEHPNNHLLPPYMSRPMFIPDSNQTLFSQQQGLVQQQDKPFNGGGLIHLSHELNNNNGSNNVKDDNRTTNPSSEASLFNLPFLSNNIGSGEAGGGGIMGMGSNNNASSLFNIPSPQMSATALLQKAAQMGATSSTNNNNNTTTSLLRTFGSTTSSSTSASKSATNYSAIFGGALNVNDEHDHHNNNLQHLMNSFAGEPPAPAG 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0955 438 SMART c2h2final6 145 165 IPR013087 -
Bisa01g0955 438 SMART c2h2final6 110 140 IPR013087 -
Bisa01g0955 438 SMART c2h2final6 69 91 IPR013087 -
Bisa01g0955 438 ProSitePatterns Zinc finger C2H2 type domain signature. 71 91 IPR013087 -
Bisa01g0955 438 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 28 410 IPR031140 -
Bisa01g0955 438 SUPERFAMILY beta-beta-alpha zinc fingers 68 165 IPR036236 -
Bisa01g0955 438 MobiDBLite consensus disorder prediction 1 54 - -
Bisa01g0955 438 MobiDBLite consensus disorder prediction 30 45 - -
Bisa01g0955 438 FunFam protein indeterminate-domain 5, chloroplastic-like 123 202 - -
Bisa01g0955 438 Gene3D Classic Zinc Finger 48 116 - -
Bisa01g0955 438 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 91 IPR013087 -
Bisa01g0955 438 Gene3D Classic Zinc Finger 123 202 - -
Bisa01g0955 438 FunFam protein indeterminate-domain 12-like 48 116 - -
Bisa01g0955 438 Pfam Zinc-finger double-stranded RNA-binding 69 91 IPR022755 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0955 Bisa-ChrBisa01 16024089 16027437 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0955 40 209 IDZ Gene Family AT2G02070 92.941 2.07e-117 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa01g0955 zf-C2H2_jaz 2.5e-05 CL0361