Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0913 ATGAAGAGAAGGGGCAGGGAGCTTCTTCGCTTGTATTTTTCTCTACGATCACCGACTAAACTTAACCCACTTACACAATTACCATCATCGACATGTTCTTTTCAAGGGTTTACTCCCTTCACCTCTTCTTTCTCCTCCACCACCTCGGCCCCTGATGGTGAAGAAGAGAAAACATCACCAAAGTCCCCAAGGGATTCACTGCTTCTAGAGAAGTTTAGACTCAGAAAACTTAAAGGGTCCTCTAAAACTGTACAGGGTGGCCCCCAAGCTTCAACCTTACAAACATCACGCTCTACTTCGGAGAAGGTAGCTGAAAAGGGTTTGAAGAATGAGGATGAACCCACTAAGGTAGTGAACGATTTTAAGGAGTTGGGTCTGGCCGAGGAGTTTATTGAGGTTTTGGAGAAAATAGGTGTTCTTGTCCCAAGTGAGATTCAATGTGTGGGGATTCCTGCTGTTTTGGAAGGGAAGAGTGTGCTGATGAGTTCACTATCTGGGCCTGACAGGACTCTGGCCTACTTGTTGCCTCTTATTCAGCTGCTGAGACGGGATATAGAGTTATCTGGTTCGAATTCACAGCATCCCCGGGCCATTGTTCTATGTGCCACAGAGGAGAAAGCTGAACAGTGCTTTAATGCTGCAAAATATATCATCAATCATGCAGAATCGAAGTCTGCAAAGCTTGATGCTTCAGCACATAATGGGCAGTCAAATGTCTCCATTGGCCTTGTAATTGGACCTCCTAGTGAGATTCTTCAATACATTGAAGAGGAGACAGTTATTCCTGCTGAAATCAGATATTTGGTGTTGGATGAGGTCGACCACATGTTTGATATTGGCCTGGGCCCTGAAATTCGCAAGATTAACAGACCATTACAAGAGTTTGCGTCAAAATCCACTTCCAAAGAATTGCAAACTGTTTTGTTCACTTCAACAATTACAGAGATTTTGGGTGAAGAATCTCCCATTATAAAGCATCTTGAGAATAATCACGCAGGAAAAGTTTCTGCAATGTTGTTAGAAATGGATCCAGCAGAAGTCTTTCATCTCACAGACTCCCCGGACGCTCTAAGGAAGAAAATGACAGAAGCCATGGATTCCCTACTGTAA 1110 0.4378 MKRRGRELLRLYFSLRSPTKLNPLTQLPSSTCSFQGFTPFTSSFSSTTSAPDGEEEKTSPKSPRDSLLLEKFRLRKLKGSSKTVQGGPQASTLQTSRSTSEKVAEKGLKNEDEPTKVVNDFKELGLAEEFIEVLEKIGVLVPSEIQCVGIPAVLEGKSVLMSSLSGPDRTLAYLLPLIQLLRRDIELSGSNSQHPRAIVLCATEEKAEQCFNAAKYIINHAESKSAKLDASAHNGQSNVSIGLVIGPPSEILQYIEEETVIPAEIRYLVLDEVDHMFDIGLGPEIRKINRPLQEFASKSTSKELQTVLFTSTITEILGEESPIIKHLENNHAGKVSAMLLEMDPAEVFHLTDSPDALRKKMTEAMDSLL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0913 369 SMART ultradead3 138 336 IPR014001 -
Bisa01g0913 369 MobiDBLite consensus disorder prediction 79 111 - -
Bisa01g0913 369 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 316 IPR027417 -
Bisa01g0913 369 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 296 369 IPR002004 GO:0003723
Bisa01g0913 369 Pfam Poly-adenylate binding protein, unique domain 315 366 IPR002004 GO:0003723
Bisa01g0913 369 Gene3D - 85 319 IPR027417 -
Bisa01g0913 369 MobiDBLite consensus disorder prediction 43 65 - -
Bisa01g0913 369 MobiDBLite consensus disorder prediction 82 101 - -
Bisa01g0913 369 SUPERFAMILY PABC (PABP) domain 315 366 IPR036053 GO:0003723
Bisa01g0913 369 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 150 331 IPR014001 -
Bisa01g0913 369 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 47 315 - -
Bisa01g0913 369 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 119 147 IPR014014 GO:0003724
Bisa01g0913 369 SMART poly_2 309 368 IPR002004 GO:0003723
Bisa01g0913 369 Pfam DEAD/DEAH box helicase 144 314 IPR011545 GO:0003676|GO:0005524
Bisa01g0913 369 Gene3D - 320 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0913 Bisa-ChrBisa01 15123701 15125914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0913 295 368 Eukaryotic Initiation Factors Gene Family AT2G23350 41.026 2.70e-10 60.1