Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0895 ATGGGTTGTGTTCAGGCTAAGCCGTCGGAGGGTTCAGAAGCTAGGGGCTTAGAGAGATTGAAATTAGAGAATGGATATGTTGGAAACGGGGATTTAATTGCACATCGACGGTCGATGGGTCAAAGATATGAACGCGGGGCGGTTGGTAGGTTACACTGGCGCGAAAGCGGAAAGGATCGCGTTGGGCTTGGTATTGGGGACGCAGAAAGGCGAGGTCGTTGTGATGGCGGTGTAAGAGGAGGTGGGGATGTGAAGAAATTGACCAATAGAGAGGGGAAGAGAAATGCTGTGCATGATAGTGAAAAATTGGCAAGGAAATCTTTCGACGATGAGATGGTTGAAGGGTGGCCCAAATGGCTAGTTGATAATGTTCCTAGAGAAGTACTCGCTGGCTTGGTTCCCAAGAGTGCTGAATCATACAAAATGATTGATAAGGTAGGACAGGGTACCTACAGCAATGTTTATAAAGCACGGGATCGGGACACTGGAGAAGTCGTGGCCCTCAAGAAGGTCCGCTTTGATACATCCCAGCCTGAAAGCATTAAATTTATGGCAAGAGAGATTACCATATTGCAGAGATTGGATCATCCCAATGTCATAAAACTCAAAGGATTGGCCACATCTAGAATGCAATACAGTCTTTATCTTGTTTTTGATTTCATGCAGTCAGACCTGGCTAGAATAATTTCTCGTCCTGAAGAAAGACTCACTGAACCGCAGGTCAAGTGCTATATGCATCAATTACTTTCAGGTCTGCAGCATTGTCATGATAGGGGCATTTTGCATCGAGATATTAAGGGGTCAAACCTTTTGATTGATAAACAAGGGATGCTTAAGATTGCTGATTTTGGGCTTGCCAATTATTATAGTCCAAACAATGACCAGCCTCTCACAAGCAGGGTTGTGACACTATGGTACAGAGCTCCTGAACTGTTATTAGGCGCCACGAATTATGGAGTTGGTATTGATCTTTGGAGCGCTGGATGCCTCTTGGCAGAGATGTTTACAGGAATTCCAGTTATGCCAGGCAGAACAGAGGTTGAGCAGCTTCATAGAATTTTCAGGCTATGTGGCACACCATCAGAGGAGTATTGGAAAAAATTGAAACTTTCTACAACATTTAGACCTCCAAAGTATTACAGACCCAGCCTTGTAGAATCTTTTAGGGATCTCCCCTCATCGTCTCTGGGCCTTTTATCTACTCTGCTTACTTTGGATCCTATATACCGTGGCAATGCATCTAAAGCTCTTCAAAATCAGTTTTTCTTTGGAAGCCCATTGGCATGTGACCTCTCTGGTTTGCCTGTAATCTACCGAGAAGATGATGAGCAAAATCAAGCTGATGAACAGATCAAGTACATGAACTCCAAAATAAGACGATCTCGTACACTTCATGAGTGTCGAAGGAAGAATCTGGCATCTAGTAGGCCAATAGAGCATACTGTATCTTCTAAAGAGGGATTGATCGGCAATGTTGAGGCAAATGTTCCAAACGAAGAACAGGGTAGCAAAACCACAACCAGCAGTACCCCATCTATTTTCAACCCAGCTGAGGCAAAGGATCATCACTCTCCTTTATTTCCTTCATATGAGGCTTCAGATGATCAAAAGCCGTCCACGAAAATCCATCCCCATGCCAATGGTGGTGAAAACATAAAGAACCTACCTCCATTACCCAAGTTAAAACTACATGCACCCAAGAAAGACGACAACAATCACAGATCACACCACGTCCTCAGGTCTACTTCCTCCAGAGAATTTAGAAACCCAAAACAGGGGAAGCAATTAGTCTTTGAAATTGATGATTAG 1809 0.4395 MGCVQAKPSEGSEARGLERLKLENGYVGNGDLIAHRRSMGQRYERGAVGRLHWRESGKDRVGLGIGDAERRGRCDGGVRGGGDVKKLTNREGKRNAVHDSEKLARKSFDDEMVEGWPKWLVDNVPREVLAGLVPKSAESYKMIDKVGQGTYSNVYKARDRDTGEVVALKKVRFDTSQPESIKFMAREITILQRLDHPNVIKLKGLATSRMQYSLYLVFDFMQSDLARIISRPEERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKQGMLKIADFGLANYYSPNNDQPLTSRVVTLWYRAPELLLGATNYGVGIDLWSAGCLLAEMFTGIPVMPGRTEVEQLHRIFRLCGTPSEEYWKKLKLSTTFRPPKYYRPSLVESFRDLPSSSLGLLSTLLTLDPIYRGNASKALQNQFFFGSPLACDLSGLPVIYREDDEQNQADEQIKYMNSKIRRSRTLHECRRKNLASSRPIEHTVSSKEGLIGNVEANVPNEEQGSKTTTSSTPSIFNPAEAKDHHSPLFPSYEASDDQKPSTKIHPHANGGENIKNLPPLPKLKLHAPKKDDNNHRSHHVLRSTSSREFRNPKQGKQLVFEIDD 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0895 602 SUPERFAMILY Protein kinase-like (PK-like) 135 427 IPR011009 -
Bisa01g0895 602 PANTHER CELL DIVISION PROTEIN KINASE 138 426 - -
Bisa01g0895 602 MobiDBLite consensus disorder prediction 469 594 - -
Bisa01g0895 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 260 272 IPR008271 GO:0004672|GO:0006468
Bisa01g0895 602 ProSiteProfiles Protein kinase domain profile. 140 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0895 602 ProSitePatterns Protein kinases ATP-binding region signature. 146 169 IPR017441 GO:0005524
Bisa01g0895 602 MobiDBLite consensus disorder prediction 496 515 - -
Bisa01g0895 602 Gene3D Phosphorylase Kinase; domain 1 130 222 - -
Bisa01g0895 602 SMART serkin_6 140 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0895 602 FunFam probable serine/threonine-protein kinase At1g54610 127 222 - -
Bisa01g0895 602 Pfam Protein kinase domain 140 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0895 602 MobiDBLite consensus disorder prediction 562 584 - -
Bisa01g0895 602 FunFam Putative serine/threonine-protein kinase 223 460 - -
Bisa01g0895 602 Gene3D Transferase(Phosphotransferase) domain 1 223 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0895 Bisa-ChrBisa01 14837916 14844691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0895 135 484 Core Cell Cycle Gene Families AT5G10270 42.432 1.93e-94 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa01g0895 Pkinase 6e-68 CL0016