Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0888 ATGGAAACGTCTTCATTTTCTGCTGGGGTGCGACTCCATGGCGAAAGCCCTCTTCCCTCACTCCTCCAAGGCCGCTTTCAAGTTCGTTTCCAAATCCTAGCGAAGTTGGAACCACGCTTCGCACCTGCAACGTCACTTCCTCTTGGCCGAAAACTGAGCCCTGAAATCCCCTCTTCTTCTATCGAAGGCTTCGCTGGTGCTGAAGGCAGCCGGGGAATTGATAACTTTCGAGGTTGTGTGCGATATACCTATGACAGTCTTCTAAACAGTCGTTCAAATGCAATCTTAGATATTAAAATGGACTCGCAAGCTGAAGAGTTGCCTCAATACATACATATAAATCAGAATGAATTTTTTAATAGAAGGCATGTGAAGCAAAAGGAGGAGGATATTGCTATATGTGAATGCAAATATATTGCCAATGACCCTGATAGTGCATGCGGGGACAGCTGTCTCAATGTATTAACCAGCTCTGAATGCACTCCTGGTTATTGCCCCTGTGGCGACTTTTGCAAAAATCAGAGATTTCAGAAGCGTGAATATGCTAAAACAAAGCTATTCAAAACTGAAGGCCGTGGATGGGGTCTTTTGGCTGATGAGAACATTAAGGCAGGACAATTTATCATTGAATACTGTGGAGAAGTAATTTCATGGAAAGAAGCCAAGCGTAGATCCCAAGCTTATGAAACTCAAGGTCTCAAGGATGCATTTATTATTTGTCTTAATGCCTCTGAATCTATTGATGCAACTAGAAAGGGAAGCCTTGGTAGATTTATAAATCATTCATGTGAGCCAAATTGTGAGACAAGGAAATGGAATGTCTTGGGGGAGATAAAGGTTGGAATATTTGCAAAGCAAGACATTCCTATAGGAGCTGAATTGGCATATAATTATAATTTTGAGTGGTTTGGTGGTGCAAAGGTCCGTTGCCTCTGTGGTGCAGTCAAATGTTCGGGATTCCTTGGAGCAAAATCCCGTGCTTTTCAGGAGGATACATATTTATGGGAAGATGATGATGAAAGGTACTCTGTGGAGAAAATTCCAATATATGACTCTGCGGAGGATGAGCCTCCGTTAAAGGTCCTTAGAAACTTGAATTCTGAAAATTCTGCGAGCAAGTTTAATGGAAAAATTGAACATTCCGTGGATATAATTATAAAACCTGAGCAACTATCAGAATCTACCGTTTTTAGCGTTCAGCCACTTGGTTCAGTTCCGATGAAGGGTTTACACGGCAATTCAGTAAAAACAGAAATAGGAAGTGAGGATATGAAATTGTACTCAAGAGATACTCAACAGGCGTTTCCACAAAATAATGCAATGATATCACGTATCCGAAGTAATACTGCAGGCCGAAACTATCGCATTGGACCTGGTTCCATGTCCACCAAAAGATCCAAGACATATAATGGAAGGTTTAAAAATATCATACAGAAGCAAGTAGATGCGAAGTCTGCAGCTGAATCTTTAGCATCAAAGGAAGCACAAGAGGAGATTTTAAGATACGAGGAAATGAAGAATGAGGCAACTTCGGCACTTGACACCTTATACAATGAAATACGACCAGCCATTGAAGAACATGAGAGGGATAGCCAAGACAATGTATCCACAAGCGTAGCAGAGAAGTGGATTGAGGCTTGCTGCTTGAAGATGAAGGCGGAATTTGACCTCTACGCCTCCATTGTCAAAAATATTGCCTGCACACCTCCAAAGCCACGAGGCCAACCAAAGCCTACCCAAGTTGATAATGAAAACGAAATTAAGCTATTGACGAATTGA 1779 0.4177 METSSFSAGVRLHGESPLPSLLQGRFQVRFQILAKLEPRFAPATSLPLGRKLSPEIPSSSIEGFAGAEGSRGIDNFRGCVRYTYDSLLNSRSNAILDIKMDSQAEELPQYIHINQNEFFNRRHVKQKEEDIAICECKYIANDPDSACGDSCLNVLTSSECTPGYCPCGDFCKNQRFQKREYAKTKLFKTEGRGWGLLADENIKAGQFIIEYCGEVISWKEAKRRSQAYETQGLKDAFIICLNASESIDATRKGSLGRFINHSCEPNCETRKWNVLGEIKVGIFAKQDIPIGAELAYNYNFEWFGGAKVRCLCGAVKCSGFLGAKSRAFQEDTYLWEDDDERYSVEKIPIYDSAEDEPPLKVLRNLNSENSASKFNGKIEHSVDIIIKPEQLSESTVFSVQPLGSVPMKGLHGNSVKTEIGSEDMKLYSRDTQQAFPQNNAMISRIRSNTAGRNYRIGPGSMSTKRSKTYNGRFKNIIQKQVDAKSAAESLASKEAQEEILRYEEMKNEATSALDTLYNEIRPAIEEHERDSQDNVSTSVAEKWIEACCLKMKAEFDLYASIVKNIACTPPKPRGQPKPTQVDNENEIKLLTN 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0888 592 Gene3D SET domain 83 338 IPR046341 -
Bisa01g0888 592 ProSiteProfiles AWS domain profile. 129 180 IPR006560 GO:0005634|GO:0042054
Bisa01g0888 592 Pfam AWS domain 142 179 IPR006560 GO:0005634|GO:0042054
Bisa01g0888 592 MobiDBLite consensus disorder prediction 568 592 - -
Bisa01g0888 592 FunFam Histone-lysine N-methyltransferase 96 334 - -
Bisa01g0888 592 SUPERFAMILY SET domain 107 319 IPR046341 -
Bisa01g0888 592 SMART set_7 182 305 IPR001214 GO:0005515
Bisa01g0888 592 ProSiteProfiles Post-SET domain profile. 306 322 IPR003616 -
Bisa01g0888 592 MobiDBLite consensus disorder prediction 578 592 - -
Bisa01g0888 592 Coils Coil 492 519 - -
Bisa01g0888 592 PANTHER SET DOMAIN PROTEINS 100 577 - -
Bisa01g0888 592 SMART PostSET_3 306 322 IPR003616 -
Bisa01g0888 592 ProSiteProfiles SET domain profile. 182 299 IPR001214 GO:0005515
Bisa01g0888 592 SMART shorttest3 129 181 IPR006560 GO:0005634|GO:0042054
Bisa01g0888 592 Pfam SET domain 193 299 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0888 Bisa-ChrBisa01 14683646 14694342 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0888 164 321 C2H2 Transcription Factor Family AT2G23740 33.146 4.67e-20 93.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa01g0888 SET 1.9e-18 No_clan