Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0883 ATGGGGGAACCGCTGGAGCCTGTGATATCAGGGTATAGCAAATCCGGAGAGCTGACGGCGATGGTGTCGGCGCTGACGCACGTGGTGTCGTCAGGTTCTTCTGGACAGCGAGGCTCCGCCGAATTGGTCCAAGGAATTAGTGGGTTTCCTATGATAGCAGGTTTTGGACAGCTTTCTTCTCCTCGTTTCTCTCAATCTACCTATGCATCCCCTGTTCTGGGCACTGTCTCTGGTCAGAAAAGAGGCCGTCAAGAAGAAGATGAACAGCAACAACAACAACAAGCACTCTATACAGCCATTCGTCAATTCACTGCACCATCACTTGGTGACTCATCATCATCAGTAACTGAGGAAGCTGGGAATATCGCCACAAATTCTGGGGCAGGTGCGGCGGTTACACCATCCTCCGCCACCGTATCGGTGACGGCGTCGAGTGAAACTGGTTCGTATGAGGAAACAGGGGAGAGGAGGAGGAGATACAGAGGAGTGAGGCAGAGGCCGTGGGGGAAGTGGGCAGCGGAGATTCGCGATCCCCACAAGGCAGCGAGAGTTTGGCTGGGCACCTACGAGACGGCGGAAGCGGCGGCCAGAGCTTACGATGAAGCCGCATTGAGGTTCAGAGGAAATAGAGCCAAACTAAATTTCCCAGAAAACGTCAGAGCGGTTCCGCCGCCAGTTCAAACTTTTCCGGCTACCACCAGTTTTCCTCTGTCGTCCACGGCGTCGCAGCCGTTCATGCGGTCGCCTTCTTTTCAGGGGCAGTCTGATTTGCTCAGAGACTATTGGCAATACTCTCAGTTGCTACAGGGCTCCGGCGACTTATCCGGACAACAGCAGCCCCCGCCTCCGCAGCAGCCGCCAGCGAATTTGGTGCAGCAGTGGTTATATAACTCACAATTGGGTGTTTTTCAATCTTCTTCTTCGTTGTTGTCGCCACCATCTTTGTCTTCTTCGTCATCTCCAAGTGCATTTTCGCCTTCTAGTCAGTTGTCCTCTGCTTCATTCTCCCTGTTTTCTGCTCAGCAAATGGGGCATCTCCGACCACCGGGAAACCGGACTCAAGGGGGAGATGGCTTGGATTTTCCGGCGTTGACATGGGCAGACACCGGTAGCTATCCTCCGCCGTCTGGTTGA 1134 0.5406 MGEPLEPVISGYSKSGELTAMVSALTHVVSSGSSGQRGSAELVQGISGFPMIAGFGQLSSPRFSQSTYASPVLGTVSGQKRGRQEEDEQQQQQQALYTAIRQFTAPSLGDSSSSVTEEAGNIATNSGAGAAVTPSSATVSVTASSETGSYEETGERRRRYRGVRQRPWGKWAAEIRDPHKAARVWLGTYETAEAAARAYDEAALRFRGNRAKLNFPENVRAVPPPVQTFPATTSFPLSSTASQPFMRSPSFQGQSDLLRDYWQYSQLLQGSGDLSGQQQPPPPQQPPANLVQQWLYNSQLGVFQSSSSLLSPPSLSSSSSPSAFSPSSQLSSASFSLFSAQQMGHLRPPGNRTQGGDGLDFPALTWADTGSYPPPSG 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0883 377 Pfam AP2 domain 159 208 IPR001471 GO:0003700|GO:0006355
Bisa01g0883 377 MobiDBLite consensus disorder prediction 125 158 - -
Bisa01g0883 377 MobiDBLite consensus disorder prediction 341 377 - -
Bisa01g0883 377 SMART rav1_2 159 222 IPR001471 GO:0003700|GO:0006355
Bisa01g0883 377 SUPERFAMILY DNA-binding domain 159 217 IPR016177 GO:0003677
Bisa01g0883 377 PANTHER DNA-BINDING DOMAIN 107 311 IPR044808 GO:0003700|GO:0009873
Bisa01g0883 377 MobiDBLite consensus disorder prediction 125 149 - -
Bisa01g0883 377 ProSiteProfiles AP2/ERF domain profile. 159 216 IPR001471 GO:0003700|GO:0006355
Bisa01g0883 377 FunFam Ethylene-responsive transcription factor 2 158 217 - -
Bisa01g0883 377 CDD AP2 167 218 IPR001471 GO:0003700|GO:0006355
Bisa01g0883 377 Gene3D AP2/ERF domain 158 218 IPR036955 GO:0003700|GO:0006355
Bisa01g0883 377 PRINTS Ethylene responsive element binding protein signature 182 198 IPR001471 GO:0003700|GO:0006355
Bisa01g0883 377 PRINTS Ethylene responsive element binding protein signature 160 171 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0883 Bisa-ChrBisa01 14617029 14618416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0883 151 233 AP2-EREBP Transcription Factor Family AT2G33710 67.470 7.41e-35 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g0883 AP2 4.5e-14 CL0081