Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0879 ATGATTAGACATGCTAATCTAAGAAAAATGACTAGGACATCACTAGCCGCAAGAGCAACTTCAGGGAGGGGAAGGATGTCGCATAGGAAATTCGAACATCCCAGGCATGGATCATTGGGATTTCTTCCCAGGAAGCGGGCTGCTCGTCACAGGGGGAAAGTGAAGGCATTCCCCAAGGATGACCCAACTAAGCCACCCAAGCTCACTGCCTTCTTGGGTTACAAGGCAGGCATGACACACATTGTTAGAGAGGTGGAGAAACCGGGATCGAAGCTTCACAAGAAGGAGACTTGTGAACCTGTTACAATTATTGAGACCCCTCCAATGGTTATTGTTGGGGTTGTGGGTTATGTGAAAACTCCCCGTGGTCTTCGAACATTGAACACTGTGTGGGCTCAGCATCTGAGTGAAGAGTTGAGGCGTAGATTCTATAAGAATTGGTGCAAGTCCAAGAAGAAGGCTTTCACTAAGTACTCTAAGCTGTACGAATCTGAAGAAGGAAAGAAAAACATTCAGGCACAGCTTGAGAAAATTAAGAAGTATGCATCTGTTGTCCGTGTTTTGGCTCACACTCAGATTCGAAAAATGAAGGGTTTGAAGCAGAAGAAAGCACACCTCATGGAGATTCAGGTCAATGGTGGGACTGTTGCACAAAAGGTGGACTATGCTTACAATTTCTTTGAGAAGCAGGTTCCTGTTGATGCTGTGTTCCAGAAGGATGAGATGATTGATATCATTGGTGTGACAAAGGGTAAAGGTTATGAAGGTGTTGTTACTCGTTGGGGTGTTACCCGTCTTCCCCGAAAGACTCACAGAGGTCTGAGGAAGGTGGCATGTATTGGTGCATGGCATCCGGCAAGAGTTTCTTTCACCGTTGCCAGGGCAGGTCAGAATGGATACCACCACCGAACTGAGTTAAACAAGAAGGTTTACAAGCTTGGCAAAGCTGGACAGGAATCACACACTGCTGATACTGAGTTCGACAGGACCGAGAAAGACATAAACCCAATGGGTGGGTTCCCTCACTATGGTGTCGTGAAGGATGACTATTTGATGGTCAAGGGATGCTGTGTTGGTCCCAAGAAAAGGGTTGTTACATTGCGCCAATCCCTGCTTAAGCAGACTTCTCGTCTTGCCCTTGAGGATATTAAACTCAAGTTCATTGATACCTCTTCAAAGTTTGGGCATGGTCGTTTCCAGACAACACAGGAGAAGCAGAAGTTCTATGGACGCCTTAAGGCATGA 1245 0.4635 MIRHANLRKMTRTSLAARATSGRGRMSHRKFEHPRHGSLGFLPRKRAARHRGKVKAFPKDDPTKPPKLTAFLGYKAGMTHIVREVEKPGSKLHKKETCEPVTIIETPPMVIVGVVGYVKTPRGLRTLNTVWAQHLSEELRRRFYKNWCKSKKKAFTKYSKLYESEEGKKNIQAQLEKIKKYASVVRVLAHTQIRKMKGLKQKKAHLMEIQVNGGTVAQKVDYAYNFFEKQVPVDAVFQKDEMIDIIGVTKGKGYEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFTVARAGQNGYHHRTELNKKVYKLGKAGQESHTADTEFDRTEKDINPMGGFPHYGVVKDDYLMVKGCCVGPKKRVVTLRQSLLKQTSRLALEDIKLKFIDTSSKFGHGRFQTTQEKQKFYGRLKA 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0879 414 FunFam 60S ribosomal protein L3 69 156 - -
Bisa01g0879 414 Gene3D Translation factors 69 410 - -
Bisa01g0879 414 Gene3D Ribosomal protein L3, domain 3 26 299 IPR044892 -
Bisa01g0879 414 MobiDBLite consensus disorder prediction 1 39 - -
Bisa01g0879 414 FunFam 60S ribosomal protein L3 251 299 - -
Bisa01g0879 414 Gene3D - 108 232 - -
Bisa01g0879 414 PANTHER 60S RIBOSOMAL PROTEIN L3-RELATED 26 409 IPR045077 GO:0003735|GO:0005840|GO:0006412
Bisa01g0879 414 FunFam Ribosomal protein L3 290 414 - -
Bisa01g0879 414 FunFam 60S ribosomal protein L3 108 232 - -
Bisa01g0879 414 Pfam Ribosomal protein L3 26 395 IPR000597 GO:0003735|GO:0005840|GO:0006412
Bisa01g0879 414 SUPERFAMILY Translation proteins 29 395 IPR009000 -
Bisa01g0879 414 ProSitePatterns Ribosomal protein L3 signature. 237 260 IPR019926 -
Bisa01g0879 414 FunFam 60S ribosomal protein L3 26 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0879 Bisa-ChrBisa01 14563761 14567904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0879 26 412 Cytoplasmic Ribosomal Protein Gene Family AT1G43170 86.822 0.0 701