Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0866 ATGATGGCTGCGCCACCGGAAGCTGCCACCGCCGCAAACGGTGGTGCTGAGATCATGAATAATAGTGTTAGGGATATTGCAGCAAATTCAGGTGATGATGAGAAGAGAATTGAAGGAGGGAACCGGTGGCCCCGCCAAGAAACTTTTGCTCTCTTGAAGATAAGGTCTGATATGGACGCTGCGTTTCGTGATTCAACTCTTAAAGGTCCCCTTTGGGATGAAATTTCGAGGAAACTGGCAGAACTAGGATATAACCGAAGCTCAAAAAAGTGCAAGGAGAAGTTCGAGAACGTATACAAGTACCACAAGAGAACCAAAGAGAACAGAAGTGGAAAACCCGAAGGTAAAACCTACAAGTTCTTTGATCAATTACAAGCCCTTGAAAATCAGTTCACAATCTCTCACTCTCACACTCCAAAACCACAACCATCACAACCACAACCCCACTCATCTTTCTCTACAAGGCCCACTAATGATCCTACCACAGTAACTACTACTATTACATCCACATTAAACTTAAACCCTACACTCATTTCTCCACCGACGAATGTTGCTACCACCACCACCACCACCCCTAACCCTAGGACCTTGCCAAACGTGAACTTGTTCTCCTCCACAACCACCACCTCCACCTCATCCTCCACCGCCTCCGACGAGGACATGGATGAGCGGTACCGGAAGAAGAGGAAGCTGAAGGACTACTTCCGGAGGCTGACGAGGCAGGTGCTGGCCAAGCAGGAGGAGATGCAGAAGAAGTTTCTAGAAGCCATCGACAAAAGAGAGCGCGAGAGGGCGGCCCAGCAAGAAGCTTGGAGGCTCCAAGAAATGGCGAGAATCAACAGAGAACACGACATTCTCGTCCAAGAACGCTCCACCGCTGCCGCCAAAGATGCCGCCGTCATCGCATTCCTCCAGAAGCTTTCTGGCGGCCATCAAAATCCACCAAATCCACCGACGTCAAACCCGCCCCCTCCACCGGTGACACAGGTGGTTCAAGCTGTTCAACCTCGTGATCAACAACCGCAATACACGAATAACGGTCATCATCAGAGTGGTTCCTCTTGTTCTCCTTCATCGAGGTGGCCGAAGGCGGAGGTTCATGCACTGATAAGGCTGAGGACGATTCTGGACACGAAGTATCAGGAGAATGGGCCGAAAGGCCCATTGTGGGAAGACATATCAGCGGGAATGCAGAGGCTTGGGTATAACAGAAGCTCCAAGAGATGCAAAGAGAAGTGGGAGAACATCAACAAGTACTTTAAGAAGATGAGGGAGAGCAACAAGCAACGGCGCGAAGATAGCAAGACGTGTCCTTATTTTCACGAGCTCGAAGCTCTCTACAACGAGAAGAACAAAGCGAACCATAACCCCTTCGGGACCAATAGGTCGAGCCAGGAAATGATGATGGAGCCATTGATGGTGCAACCGGAACAACAATGGAGGCCTCCTCCTCTTGAAGACGGTGGTGGTGCGAGGGAACATGCTAATATTAATGTCGGTGAAAGAGAGGGACAGGAAGAAGAAGAGGAAGAGGAGGATGATATGGTAGAAGATGGAGAGAGCGTGGAAGATGATCGAGAAGAGGGACGACGTTATGAGATGGAGGCGACAAATAAACTTCCTTCAGTGGACACCGTTGAATGA 1644 0.497 MMAAPPEAATAANGGAEIMNNSVRDIAANSGDDEKRIEGGNRWPRQETFALLKIRSDMDAAFRDSTLKGPLWDEISRKLAELGYNRSSKKCKEKFENVYKYHKRTKENRSGKPEGKTYKFFDQLQALENQFTISHSHTPKPQPSQPQPHSSFSTRPTNDPTTVTTTITSTLNLNPTLISPPTNVATTTTTTPNPRTLPNVNLFSSTTTTSTSSSTASDEDMDERYRKKRKLKDYFRRLTRQVLAKQEEMQKKFLEAIDKRERERAAQQEAWRLQEMARINREHDILVQERSTAAAKDAAVIAFLQKLSGGHQNPPNPPTSNPPPPPVTQVVQAVQPRDQQPQYTNNGHHQSGSSCSPSSRWPKAEVHALIRLRTILDTKYQENGPKGPLWEDISAGMQRLGYNRSSKRCKEKWENINKYFKKMRESNKQRREDSKTCPYFHELEALYNEKNKANHNPFGTNRSSQEMMMEPLMVQPEQQWRPPPLEDGGGAREHANINVGEREGQEEEEEEEDDMVEDGESVEDDREEGRRYEMEATNKLPSVDTVE 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0866 547 Gene3D - 361 422 - -
Bisa01g0866 547 Gene3D - 43 104 - -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 1 42 - -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 134 224 - -
Bisa01g0866 547 ProSiteProfiles Myb-like domain profile. 359 417 IPR001005 -
Bisa01g0866 547 SMART sant 357 419 IPR001005 -
Bisa01g0866 547 SMART sant 39 101 IPR001005 -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 478 547 - -
Bisa01g0866 547 CDD GT1 41 106 - -
Bisa01g0866 547 FunFam Trihelix transcription factor GT-2 361 422 - -
Bisa01g0866 547 FunFam Trihelix transcription factor GT-2 43 104 - -
Bisa01g0866 547 Pfam Myb/SANT-like DNA-binding domain 41 127 IPR044822 -
Bisa01g0866 547 Pfam Myb/SANT-like DNA-binding domain 359 446 IPR044822 -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 147 216 - -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 332 360 - -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 315 330 - -
Bisa01g0866 547 ProSiteProfiles Myb-like domain profile. 41 99 IPR001005 -
Bisa01g0866 547 PANTHER FI21293P1 24 502 - -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 503 523 - -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 308 360 - -
Bisa01g0866 547 MobiDBLite consensus disorder prediction 28 42 - -
Bisa01g0866 547 CDD GT1 360 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0866 Bisa-ChrBisa01 14366942 14369299 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0866 39 480 Trihelix Transcription Factor Family AT1G76880 53.333 3.49e-146 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa01g0866 Myb_DNA-bind_4 3e-20 CL0123