Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0864 ATGCTGGGGGACTCAGCTGCGTTAGGAGGTGGAGCTAGCTCTGGAGATGCGGCGGCGGCTGCTGCTGCTACATCGGCGGCGGCGCCAGGAGGAGCAGGAGGAGAAGGCGCAGCCCATGACAGCGGTGAGTCGGCGGTCGCTGCTGGCGGTGGTGGCGGCGTTGGATCCAATTCAGGTGAAGAGGGTGGTGGTGACCGGAGCTTCGGTGGCAACCGATGGCCCCGCCAGGAGACTCTGGCTCTCCTGAAGATACGCTCCGACATGGACGTGGCGTTTCGTGATGCCAGCGTGAAGGGTCCCTTGTGGGAAGAGGTTTCCAGGAAGCTAGCAGAGCTTGGATACCATAGAAGCGCGAAGAAGTGCAAGGAGAAATTCGAGAACGTGTACAAGTACCACAAGCGAACAAAGGAAGGCCGAACCGGAAAATCAGACGGCAAAACGTACCGTTTCTTCGATCAATTAGAAGCACTGGATCATCACAACAACCACCCTCATTCTTCATTAATTATTCAGTCCTCTACTTCCAATTCCGCTCCTCTACCTGCACCCCCCGTCTCCGTCATCCTCACCACCGCCACCGCTCAACCTCCTCCACTAATGGCAGTGCCTCCAGTGACGCCTAATCCTCCTCCTCAACCTCCTCATGTTACTGCCACCACTGTTCCATCAATGGCCACTCCAATTCCTCCATTGTACCCTCCACCACAACCGACAACGAACCCTACTTTTATGCCCTCTTTTGCCAGCATACCGACGGATCTCTTATCCAATTCGACTTCATCGTCGACGTCGTCGGATGAGACGATAGAGGCACGGCGTAAGCGGAAGCGCAAGTGGAAGGACTTCTTCGAGGGGCTGATGAAGGAGGTGATAGAGAAGCAGGAGGAGCTCCAGAAGAGATTCCTGGAGGCCATAGAGAAGCGCGAGCATGAGAGGATGGTTCGGGAAGAAGCTTGGAGAATGCAGGAGATGGCAAGGATCAACAAGGAGAGAGAAATACTCGAGCAGGAAAGATCCATCGCCGCCGCCAAAGACGCCGCCGTCATGGCCTTCTTGCAGAAGATCGCCGAACAGCACAATCTCACGCCGCCGCCGCCGCCGCCACCCAATAACATCAGCATCACTAATCCTCCGCAGCAGCCCGAGCCGGCACCTGCACCTGCACCTCCACAACCTCCTCCGCCGCAATCTGCAGCGGTGCAACAACCAACTTCGGTTCTTTCGACGCCGCCACCGCCGACGCAACAAGCGATAACGAGTACGGAAATTGTGACGAAGAATGAAGAGAATAATAATAATAACAATAACAATAATTTGACGACGACGCCGATGAGTGCGTCATCGTCAAGGTGGCCGAAAATGGAGGTTGAGACGCTGATTAAGCTACGGACAAACCTGGACCCGAAGTACCAGGAGAACGTGCCGAAGGGGCCACTGTGGGAGGAGATCTCCGCCGCGATGAAGAGGCTCGGGTATAATCGGAACGCCAAGAGGTGCAAGGAGAAGTGGGAGAACATCAACAAGTACTTCAAGAAGGTTAAGGAGAGCAACAAGAGGAGGCCAGAAGATTCCAAGACCTGTCCCTACTTCCACCAGCTGGATGCTCTATACAGGCAGAAGAATTTCAAGGTGCTTTCCGCGCAGCCGCCGCCGCCGGAAAACATGATGGCCGCGCCGCTCATGGTGCGGCCGGAGCAGCAGTGGCCACCGCAACAGCAGCACCAGCAAGATACAAGACCGGGGCGGGAGGTAATGATGGGAAATGCGGAGAATGAAGCAATGGAGGAAGACGAAGAGGAGGAAGATAAGGATAGAGAAGAAGAGGAGGAGGAGGAGGACGAAGGGGGAAGTAGTAACTATGAGATAGTGGCGAGCAAGCCAGCTACTTCAGTGGGTGCTTCAGAGTGA 1908 0.555 MLGDSAALGGGASSGDAAAAAAATSAAAPGGAGGEGAAHDSGESAVAAGGGGGVGSNSGEEGGGDRSFGGNRWPRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYHRSAKKCKEKFENVYKYHKRTKEGRTGKSDGKTYRFFDQLEALDHHNNHPHSSLIIQSSTSNSAPLPAPPVSVILTTATAQPPPLMAVPPVTPNPPPQPPHVTATTVPSMATPIPPLYPPPQPTTNPTFMPSFASIPTDLLSNSTSSSTSSDETIEARRKRKRKWKDFFEGLMKEVIEKQEELQKRFLEAIEKREHERMVREEAWRMQEMARINKEREILEQERSIAAAKDAAVMAFLQKIAEQHNLTPPPPPPPNNISITNPPQQPEPAPAPAPPQPPPPQSAAVQQPTSVLSTPPPPTQQAITSTEIVTKNEENNNNNNNNNLTTTPMSASSSRWPKMEVETLIKLRTNLDPKYQENVPKGPLWEEISAAMKRLGYNRNAKRCKEKWENINKYFKKVKESNKRRPEDSKTCPYFHQLDALYRQKNFKVLSAQPPPPENMMAAPLMVRPEQQWPPQQQHQQDTRPGREVMMGNAENEAMEEDEEEEDKDREEEEEEEDEGGSSNYEIVASKPATSVGASE 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0864 635 ProSiteProfiles Myb-like domain profile. 71 129 IPR001005 -
Bisa01g0864 635 PANTHER FI21293P1 38 593 - -
Bisa01g0864 635 MobiDBLite consensus disorder prediction 566 635 - -
Bisa01g0864 635 MobiDBLite consensus disorder prediction 360 399 - -
Bisa01g0864 635 Coils Coil 287 307 - -
Bisa01g0864 635 MobiDBLite consensus disorder prediction 359 451 - -
Bisa01g0864 635 MobiDBLite consensus disorder prediction 400 451 - -
Bisa01g0864 635 FunFam Trihelix transcription factor GT-2 451 512 - -
Bisa01g0864 635 Coils Coil 586 614 - -
Bisa01g0864 635 SMART sant 69 131 IPR001005 -
Bisa01g0864 635 SMART sant 447 509 IPR001005 -
Bisa01g0864 635 FunFam Trihelix transcription factor GT-2 73 134 - -
Bisa01g0864 635 Coils Coil 324 344 - -
Bisa01g0864 635 Gene3D - 73 134 - -
Bisa01g0864 635 Gene3D - 451 512 - -
Bisa01g0864 635 ProSiteProfiles Myb-like domain profile. 443 507 IPR001005 -
Bisa01g0864 635 MobiDBLite consensus disorder prediction 590 617 - -
Bisa01g0864 635 CDD GT1 449 514 - -
Bisa01g0864 635 CDD GT1 71 136 - -
Bisa01g0864 635 MobiDBLite consensus disorder prediction 1 72 - -
Bisa01g0864 635 Pfam Myb/SANT-like DNA-binding domain 71 157 IPR044822 -
Bisa01g0864 635 Pfam Myb/SANT-like DNA-binding domain 449 536 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0864 Bisa-ChrBisa01 14335283 14337939 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0864 65 568 Trihelix Transcription Factor Family AT1G76880 55.977 2.29e-164 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Bisa01g0864 Myb_DNA-bind_4 2.5e-21 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0864 01 14335283 14337939 Bisa01g0864 01 14335283 14337939 ECH