Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0859 ATGGGTAGAAAGAAGCTGATTTCCCGCGAGGATAACCCTCCCATGGCTTCTCAAGGTGGCGGGAAGTCGAAGAAGAAGGGGCTTGTGATCGACGATGATGAGTATTCTATCGGTACAGAACTCTCGGAGGAGGTGCTAGCTCAGGCCGAGAAGCCTGCGGTGACGGGAAAGAATAAAGGTAAGAAGGGTAACTTGAAAGCTTCGACAGCTGAGGACGAAGATGTGGAAAAGTTGATCGATGATGATGATGATGATGATGATGATGTACCTGAAGTTGTGATTACCGGGAAGAAGAAGGGAAAATCGAAAAAGGGTGGTGGGAACAGTGTGTTTTCTGCTTCGAACTTTGGTATGCTTGGTGATGAGGAGGATGGAGAGGATGAAAATGCAAATGAGAAATCCGGCTTAACTGATGAGCAAGATGGTGATGAGGACGATGAACCAGTTGTTAGTTTTTCGGGTAAGAAAAAGTCCTCAAAGGGTTCCAAAAAGGGTGGTGGTAGTTTGTTCGCTGCATCAGTTTTTGATGCTATTGACGATGATAATGAAGGCGAGGTGATAGATAATTCTGTGGATTACAGCAGAGAAGAGAATGATGACATGGATGAACCAGTTATTGCTTTCACGGGGAAGAAAAAATCATCGAAAAATAGCAAGAAAGGTGGTGCTGTATTCACAGCATCTAGTCTGGGTGATACTGACGAAGAGCAGGACAAAAATGAAAAGGAAGCCGAGGATGAAGACATTGCTCCAATCACTTTCTCAGGGAAGAAAAAGAAGTCATCTAAGTCTTCAAAGAAGACTGTTAATTCATTTATTGCAGCTTTTGCTGAGGAGGAGGTTGATGATACGGTTTCCGTGCCTGAGTCTGCTGCTATAGCTGGTGAAGATAAGGTTGAGGATGAAGATGTTTCTGTAGTATCATTTTCAGGTAAAAAGAAGTCTTCAAATAAGAAAAATAAGACTGCTAGTGCCAAAGCTAGTAATGACATTGAATTTGGTAGTGAAAGTTTAGATGTTGTTGAGCCTGAGCAACCTAGTGTAGCAGACAACAACAAAGCTAATAAGAGTGAAGAGGTGACTGAAACTTCAAAAAATAAGAAGAAGAAGAATAAAAGAAGTGGAAGAACTGATCAAGAAGAGGAGGATTTGGACAAGCTTCTTGCTGAGCTTGGCGAGGGCCCTCCTCCGGCAAAACCTGCTCCTCCTCCAGCACAGGATGATAAAGTTCAGGCTTCTTCTGAAGCAGCTGCTCCTGCTGTGGGGGAAAAAGAAGGGGAAGAAGAGACCACGGAGTCAGCTGCTGCAAAAAAGAAGAAGAAGAAAAAGGAAAAGGAGAAGGAGAAGAAGGCAGCTGCAGCAGCAGCAGCAGCAGCAGGTGGAAGTGCACCATATAATGAAAAGAAAGAAGAAGCTAAATCTGAGGCTACAGAATCAAAAAAGAATGAGTCCAAGACTAAAGCAGTTGACAAGAAAGTGCCAAAGCATGTTAGGGAGATGCAAGAGGCACTGGCTCGAAGAAAAGAGGCTGAAGAGAGGAAGAAAAGGGAAGAAGAGGAGAGGCTAAGGAAGGAAGAAGAGGAGAGACGTAGGCAAGAGGAACTTGAGAGACAAGCAGAAGAGGCTAGACGTAGAAAAAAGGAAAGAGAGAAGGAAAAGCTCCAGAAGAAGAAGCAAGAAGGTAAATTGTTAACTGGTAAGCAGAAGGAAGAAGCTCGTCGATTGGAGGCAATGAGGAAACAGTTTCTTTCTACTACAGGGGGTTTCTCTCTCCCTGCAGGGGATACTGGGGCACCAGCCAAACGGCCAATATATTCAACAAAAAAATCAAAACAAACCCATCATCAGAATGGTACTGCCCCTGTTAAGGCGGCTGAAATTGTAGAAGTGAAGGAAACTCAAGAGAGTACTACTGATATGGATTCATTGGAACCGGAGGAGGTTGAAGTAGTGGAGTCAAAGCAGGATGGGGACAAAGTCGAACCTTCTGAAGCTGTTGAAGAGGATGAAGTGGAAGAAGATGACGAGGAGGATGAATGGGATGCAAAGAGCTGGGATGATCTTAATCTGAATGGCAAAAGTGCATTTGCCGATGAGGAGGCAGACTCTGAGCCCGAACCAGTTATTAAAAAAGAGATAAAAAGTGCCATACCAACTCCCAATGCTGCACCTCCAGCGGCTGTCAAGTCAACAGGCACAGCTAAGAAAGCTGCTCAGGATGAGAAGCAACCACCAAGTTCAGCTGTGCCTCCCAAGCCAAGTGAAGAGAACCTTCGTTCCCCAATTTGCTGTATCATGGGCCATGTGGACACAGGTAAAACTAAGCTGCTGGATTGTATTCGAGGTACTAATGTTCAGGAAGGTGAGGCTGGTGGTATCACACAGCAAATAGGTGCTACATACTTTCCTGCTGAGAACATACGTGATAGAACAAAGGAACTAAAAGCTGATGCAAAGCTAAAAGTTCCTGGTCTACTTGTGATTGATACCCCTGGGCACGAGTCATTTACTAACTTAAGGTCACGGGGTTCTGGTTTATGTGATATTGCAATTTTGGTTGTTGACATTATGCATGGCTTAGAACAACAGACAATAGAATCACTCAATTTATTGAAAATGAGGAATACAGAATTCATTGTTGCATTGAATAAGGTGGACAGACTTTATGGGTGGAAAACATGTCGCAATTCTCCAATTGTTAAGGCAATGAAGCAGCAAACTAAAGATGTGCAAAATGAATTCAATATGAGACTTACTCAGATTATCACTCAATTCAAGGAACAGGGGTTAAACACTGAGTTGTACTATAAAAACAAAGAAATGGGAGAAACGTTCAGTATTGTACCAACTAGTGCTATAAGTGGTGAAGGAATCCCAGATTTGTTATTACTTTTGGTTCAATGGACGCAGAAAACAATGGTTCAGAAACTTACATATAGCGATGAAGTGCAGTGTACAGTTTTGGAGGTCAAGGTTGTTGAGGGCCATGGCACTACTATTGATGTTGTCTTGGTTAATGGTGTTCTTCATGAAGGAGATCAAATAGTTGTGTGTGGAATGCAGGGGCCTATTGTTACCACAATTCGAGCTTTATTGACACCTCATCCAATGAAGGAGCTCCGTGTTAAGGGGACATATCTCCATCACAAAGAAATCAAGGCTGCAATGGGTATTAAAATCACTGCTCAGGGGCTTGAACATGCTATTGCCGGTACTGGTTTATATGTGGTGAAGCCTGACGATGATTTAGAAGATGTTACAGAAGCAGCTATGGAAGATATGAAGTCAGTTATGAGCAGGATTGACAGGAGTGGTGAGGGAGTTTGTGTACAGGCATCCACTCTAGGATCTCTGGAAGCATTGCTAGAGTTTTTGAAAACACCTGAAGTGAATATTCCTGTTAGTGGTATAAGCATAGGCCCTGTCCATAAAAAGGATGTGATGAAAGCCAGTGTAATGCTTGAAAAGAAGAAAGAGTTTGCTGCGATCTTGGCATTTGATGTCAAAGTCAATGTTGAGGCTAAGGAGCTAGCAGAAGAACTGGGTGTAAAAATTTTTATGGCTGATATCATTTATCACCTTTTCGACCAGTTTAAGGCTTATATTGACAACATCAAGGAGGAAAAGAAGAAAGAAGCAGCTGATGAGGCAGTCTTCCCTTGTGTTCTGAAGATCTTACCAAACTGTATTTTCAACAAGAAGGATCCAATTGTTTTGGGAGTCGATATCCTTGAAGGCATTGCAAAGATTGGGACTCCAATTTGTATTCCTTCCAGAGATTTCATTGATATTGGTCGCATTGCATCCATTGAAAATAACCACAAACCTGTTGATTATGCCAAAAAAGGGCAGAAAGTAGCCATTAAGATTGCTGGCAGCAATCCGGAGGAACAACAAAAAATGTATGGAAGGCATTTTGAGATCGACGATGAACTTGTAAGCCATATCTCAAGGAGATCTATTGACATTCTCAAATCTAATTATCGGGATGATCTGACAATGGATGAATGGAGGCTGGTTGTGAAATTGAAAAGTGTTTTCAAGATACAATGA 4053 0.4254 MGRKKLISREDNPPMASQGGGKSKKKGLVIDDDEYSIGTELSEEVLAQAEKPAVTGKNKGKKGNLKASTAEDEDVEKLIDDDDDDDDDVPEVVITGKKKGKSKKGGGNSVFSASNFGMLGDEEDGEDENANEKSGLTDEQDGDEDDEPVVSFSGKKKSSKGSKKGGGSLFAASVFDAIDDDNEGEVIDNSVDYSREENDDMDEPVIAFTGKKKSSKNSKKGGAVFTASSLGDTDEEQDKNEKEAEDEDIAPITFSGKKKKSSKSSKKTVNSFIAAFAEEEVDDTVSVPESAAIAGEDKVEDEDVSVVSFSGKKKSSNKKNKTASAKASNDIEFGSESLDVVEPEQPSVADNNKANKSEEVTETSKNKKKKNKRSGRTDQEEEDLDKLLAELGEGPPPAKPAPPPAQDDKVQASSEAAAPAVGEKEGEEETTESAAAKKKKKKKEKEKEKKAAAAAAAAAGGSAPYNEKKEEAKSEATESKKNESKTKAVDKKVPKHVREMQEALARRKEAEERKKREEEERLRKEEEERRRQEELERQAEEARRRKKEREKEKLQKKKQEGKLLTGKQKEEARRLEAMRKQFLSTTGGFSLPAGDTGAPAKRPIYSTKKSKQTHHQNGTAPVKAAEIVEVKETQESTTDMDSLEPEEVEVVESKQDGDKVEPSEAVEEDEVEEDDEEDEWDAKSWDDLNLNGKSAFADEEADSEPEPVIKKEIKSAIPTPNAAPPAAVKSTGTAKKAAQDEKQPPSSAVPPKPSEENLRSPICCIMGHVDTGKTKLLDCIRGTNVQEGEAGGITQQIGATYFPAENIRDRTKELKADAKLKVPGLLVIDTPGHESFTNLRSRGSGLCDIAILVVDIMHGLEQQTIESLNLLKMRNTEFIVALNKVDRLYGWKTCRNSPIVKAMKQQTKDVQNEFNMRLTQIITQFKEQGLNTELYYKNKEMGETFSIVPTSAISGEGIPDLLLLLVQWTQKTMVQKLTYSDEVQCTVLEVKVVEGHGTTIDVVLVNGVLHEGDQIVVCGMQGPIVTTIRALLTPHPMKELRVKGTYLHHKEIKAAMGIKITAQGLEHAIAGTGLYVVKPDDDLEDVTEAAMEDMKSVMSRIDRSGEGVCVQASTLGSLEALLEFLKTPEVNIPVSGISIGPVHKKDVMKASVMLEKKKEFAAILAFDVKVNVEAKELAEELGVKIFMADIIYHLFDQFKAYIDNIKEEKKKEAADEAVFPCVLKILPNCIFNKKDPIVLGVDILEGIAKIGTPICIPSRDFIDIGRIASIENNHKPVDYAKKGQKVAIKIAGSNPEEQQKMYGRHFEIDDELVSHISRRSIDILKSNYRDDLTMDEWRLVVKLKSVFKIQ 1350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0859 1350 PRINTS GTP-binding elongation factor signature 878 887 IPR000795 GO:0003924|GO:0005525
Bisa01g0859 1350 PRINTS GTP-binding elongation factor signature 826 836 IPR000795 GO:0003924|GO:0005525
Bisa01g0859 1350 PRINTS GTP-binding elongation factor signature 762 775 IPR000795 GO:0003924|GO:0005525
Bisa01g0859 1350 PRINTS GTP-binding elongation factor signature 842 853 IPR000795 GO:0003924|GO:0005525
Bisa01g0859 1350 SUPERFAMILY Translation proteins 1217 1349 IPR009000 -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 294 308 - -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 1 29 - -
Bisa01g0859 1350 CDD IF2_aeIF5B_IV 1221 1316 - -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 74 90 - -
Bisa01g0859 1350 NCBIfam small GTP-binding protein domain 763 889 IPR005225 GO:0005525
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 188 209 - -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 180 266 - -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 278 690 - -
Bisa01g0859 1350 FunFam Eukaryotic translation initiation factor 5B 1100 1206 - -
Bisa01g0859 1350 SUPERFAMILY Initiation factor IF2/eIF5b, domain 3 1083 1212 IPR036925 -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 714 756 - -
Bisa01g0859 1350 CDD aeIF5B_II 982 1092 - -
Bisa01g0859 1350 Gene3D - 752 980 IPR027417 -
Bisa01g0859 1350 Pfam Translation-initiation factor 2 1086 1199 IPR023115 -
Bisa01g0859 1350 Gene3D Translation factors 981 1101 - -
Bisa01g0859 1350 FunFam Eukaryotic translation initiation factor 5B 752 980 - -
Bisa01g0859 1350 FunFam Eukaryotic translation initiation factor 5B 1213 1350 - -
Bisa01g0859 1350 Gene3D - 1102 1206 IPR036925 -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 44 168 - -
Bisa01g0859 1350 Pfam Elongation factor Tu GTP binding domain 762 970 IPR000795 GO:0003924|GO:0005525
Bisa01g0859 1350 Coils Coil 428 456 - -
Bisa01g0859 1350 Pfam Elongation factor Tu domain 2 997 1072 IPR004161 GO:0005525
Bisa01g0859 1350 Coils Coil 493 564 - -
Bisa01g0859 1350 Gene3D Translation factors 1213 1350 - -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 647 661 - -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 662 683 - -
Bisa01g0859 1350 CDD IF2_eIF5B 761 971 - -
Bisa01g0859 1350 PANTHER TRANSLATION INITIATION FACTOR IF-2-RELATED 467 1346 IPR015760 -
Bisa01g0859 1350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 759 1049 IPR027417 -
Bisa01g0859 1350 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 758 974 IPR000795 GO:0003924|GO:0005525
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 466 578 - -
Bisa01g0859 1350 MobiDBLite consensus disorder prediction 421 439 - -
Bisa01g0859 1350 FunFam eukaryotic translation initiation factor 5B 981 1100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0859 Bisa-ChrBisa01 14214278 14223567 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0859 202 1350 Eukaryotic Initiation Factors Gene Family AT1G76810 66.695 0.0 1219