Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0840 ATGGATTTCCTTGAAGGCGTGGGAGAGAGCTGCTCTCCGCCGCGCACCTTGAGCGGTTTCAGCAACTATGACGTGAGGAACGATGTTTACAATCGCTTAGTGGAAACCGGCCATGACCAAGCGGTGAGTAATCCGGAGTTTCGCGAACAGCTGGACGCTCACTTCAACCGATTGCCTCCAAGTTATGGGTTTGATGTCAACATGGACAGAGTTGAAGATGTTTTATTGCATCAGAGTCTTCTTGCTTTGGCAAGGGACCCCGACAAGCGCCCTGTCTACCATATACGCTTTTTAGAGAACATCTCTACTAGAATAGATGGTGAAGATCAACAAATTATAAGTACTCATTCTAGCTATAGGCCGTCATCTCATGCAACTAATGGTGGAGCTTTATCATCTCATAAGAGAGCAAGGGATTGTGCAGCTGAGTTTGAGCCTTGTTCTAAGCTCGAGGACCTAAATTTGGATGTTAAGAAGGACTACAAGGACATAGAGGAAGGATTTGTTACTGACAATTATTCCCTGAGGCATGAACAATCAAATGTCCCGGTTCATGAAGTTATATTTTCTACTGTTGACAAGCCAAAGCTTTTAAGCCAGCTGTCTGCATTACTGTCTGATATTGGACTTAACATCCGTGAAGCACATGTTTTTTCCACAACTGATGGCTATTCCCTTGACGTATTTGTTGTGGATGGATGGCCAGTAGAGGAAACAGATGGTTTATATGAGGCTATGGAAAAAGCTATTGCACGAAGTGAGGGGTCCTGGTCACGTTCTTTAAATTCCCATTCAGCTGTGGAGAAAGCCTTAGCAGCAGAAGCAAAATCTGGTGATTGGGAAATAGATAGGAGGTTGTTGAAGATAGGAGAAAGAATAGCATCTGGATCTTGTGGAGATTTGCATCATGGAGTTTATCTTGGCCAAGATGTTGCTGTTAAGATTTTGAGATCTGAGCATCTGAATGATGCTTTAGAAGACGAGTTTGCTCAAGAAGTGGCAATTCTGAGGCAGGTCCATCACAAAAATGTTGTTTGCTTCATCGGTGCCTGTACAAAATCTCCAAATTTGTGCATTGTCACAGAGTACATGCCTGGAGGAAGTTTGTATGATTACTTGCATAAAAACCATAATATCTTGGAGCTGTCTCTATTACTGAAGTATGCAATTGATGTCTGCAAGGGTATGGAATATTTGCACAGAAACAACATAATTCACAGGGATCTGAAGACAGCCAATCTGCTGATGGATACCCACAATGTTGTTAAAGTAGCAGATTTTGGAGTTGCTCGGTTCTTAAATCAGGGGGGAGTAATGACAGCGGAAACTGGAACATATAGATGGATGGCGCCAGAGGTCATAAACCATCAACCCTACGATCAGAAAGCTGATGTATTCAGTTTTTCCATAGTACTGTGGGAACTAGTGACAGCAAAGGTTCCATATGATACCATGACTCCACTACAAGCTGCACTGGGTGTTAGACAGGGGCTACGTCCAGAACTTCCAAAGCAAGGGCACCCTAAGCTAATAGATCTGATGCAAAGATGTTGGGAAGCAACTCCAAGCAACCGGCCATCCTTCTGTGAGATAACAATTGAACTGGAAAATCTCCTGAAAGAAGTTGGGAATGATTCAGAAGCTAATGGCAATAAGATAGAGTTTTTCATTTCCCCTTTTTGCTTGAGGGAAAAAGGAGTTACAGAAGCTGACCAATAG 1719 0.4305 MDFLEGVGESCSPPRTLSGFSNYDVRNDVYNRLVETGHDQAVSNPEFREQLDAHFNRLPPSYGFDVNMDRVEDVLLHQSLLALARDPDKRPVYHIRFLENISTRIDGEDQQIISTHSSYRPSSHATNGGALSSHKRARDCAAEFEPCSKLEDLNLDVKKDYKDIEEGFVTDNYSLRHEQSNVPVHEVIFSTVDKPKLLSQLSALLSDIGLNIREAHVFSTTDGYSLDVFVVDGWPVEETDGLYEAMEKAIARSEGSWSRSLNSHSAVEKALAAEAKSGDWEIDRRLLKIGERIASGSCGDLHHGVYLGQDVAVKILRSEHLNDALEDEFAQEVAILRQVHHKNVVCFIGACTKSPNLCIVTEYMPGGSLYDYLHKNHNILELSLLLKYAIDVCKGMEYLHRNNIIHRDLKTANLLMDTHNVVKVADFGVARFLNQGGVMTAETGTYRWMAPEVINHQPYDQKADVFSFSIVLWELVTAKVPYDTMTPLQAALGVRQGLRPELPKQGHPKLIDLMQRCWEATPSNRPSFCEITIELENLLKEVGNDSEANGNKIEFFISPFCLREKGVTEADQ 572
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0840 572 Gene3D Phosphorylase Kinase; domain 1 276 364 - -
Bisa01g0840 572 FunFam Serine/threonine-protein kinase isoform 1 277 365 - -
Bisa01g0840 572 CDD STKc_MAP3K-like 293 535 - -
Bisa01g0840 572 PRINTS Tyrosine kinase catalytic domain signature 361 374 IPR001245 GO:0004672|GO:0006468
Bisa01g0840 572 PRINTS Tyrosine kinase catalytic domain signature 506 528 IPR001245 GO:0004672|GO:0006468
Bisa01g0840 572 PRINTS Tyrosine kinase catalytic domain signature 444 454 IPR001245 GO:0004672|GO:0006468
Bisa01g0840 572 PRINTS Tyrosine kinase catalytic domain signature 463 485 IPR001245 GO:0004672|GO:0006468
Bisa01g0840 572 PRINTS Tyrosine kinase catalytic domain signature 398 416 IPR001245 GO:0004672|GO:0006468
Bisa01g0840 572 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 162 540 - -
Bisa01g0840 572 Gene3D Transferase(Phosphotransferase) domain 1 365 556 - -
Bisa01g0840 572 ProSiteProfiles ACT domain profile. 186 260 IPR002912 -
Bisa01g0840 572 Pfam Protein tyrosine and serine/threonine kinase 287 533 IPR001245 GO:0004672|GO:0006468
Bisa01g0840 572 ProSitePatterns Serine/Threonine protein kinases active-site signature. 404 416 IPR008271 GO:0004672|GO:0006468
Bisa01g0840 572 SMART serkin_6 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0840 572 ProSiteProfiles Protein kinase domain profile. 287 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0840 572 SUPERFAMILY ACT-like 185 252 IPR045865 -
Bisa01g0840 572 SUPERFAMILY Protein kinase-like (PK-like) 279 539 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0840 Bisa-ChrBisa01 13601289 13624702 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0840 24 545 MAP Kinase Kinase Kinase AT4G35780 50.093 1.58e-179 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Bisa01g0840 PK_Tyr_Ser-Thr 1.5e-72 CL0016