Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0783 ATGTCGTCGCCGGGATTCACGGGAGGTGGATTGCCGGAGTTCTACGGCGGAGCCGGCCGATCAATGGCAACCGCCACCATGGACGACCCTTCCAACACCAATCTTCGTCCTTCTCATCATCCTCTGTACCGAAGACAGCAACAACAACAACTCCCACCGATTTTTATAGATCCTTACGCGCAGATCGCAAGGCAAAATCCGAGTCACATCGGTAAGCGAACTCTTGCTGAATTTCAAACCCACCAGAACCACAACAATCAGGTTCTTTCAAACCTTCTGTTACGCTCGGTGAAGCCCAGAACCTTCCAGAATAGCTCCCCTATGTCTCCTTTGTCACCCATGGAATTCTCCATGTCCCCTGAATTGCTAAACTCTTCTTCGGGTTTTGTGTCACAGCGTTTTGGGTTGCCTCTTCTTCAGCAATCTCGCCCACAAACCATGAATCTCCCAAACACGACCATACCCATGAGTAATTCTGTTCTTTCCAAGTCTGGATTTCCATATTCAAATACTAATTGTGTTCATGAATCTGAGAAAAAGGTCATGGACCATCGGCTTCAGGAGTTGGAGAAACAGCTTCTGGAAGATAACGACGAGGAAGAAGGCGATGCGGTTTCCGGGATTACAAGCAACAAGTGGTCAGAGACGATACAGAACTTGATCAGTCCTGGAGTTCTGAATCAGAAGCCCACTTCGTCGTCACCTACTTCATCCACAACCTCAACGACGTCGTCTTCTTCCTCTGTGCCTTCCCCTGCTACCACCTGTTCGAAGCAATCGTTAATGGAGGCCGCATCCGCAATTTCCGAAGGGAAATCAGAGTCCGCGACGGAGATCCTGACCCAGTTGGCAAAGCTCTCCAACCCAAACGGCAATTCGGATCAACGATTAACTGATTATATGGTTTCCGCTCTGAAATTGCGCTTGAATCCACTTGAAAATCCACCTCATGTGGTGGAACTCTTCAGCAGCGAACACGCCGAGTCAACTCAGTTGCTCTACGAATATTCCCCTTGCTTCAAGGTTGGGTTCATGGCTGCCAATCTCGCAATCCTCGAAGCTTCATTCGAGGAGACAGAGAACGGTAACAACAAGTTTCGCGTGGTTGATTTTGACATCGGCGAGGGAAACCAGTACATAAATCTCCTGCACGCGCTCTCGGCGCGTCAGAATGGGAAACCAGCCACGGTGAACATCACGGCGGTTGCTGAGATCGGCGACGAAGAGAGATTGAAGACTGTGGGAGATAAGCTGAGGCAACAAGCAGAGCAACTTGGTTTTGGTTTCGAGTTCCAAATAGTAAACCAAAAACTCACCGAGTTGACTCGCGAGTCTCTGGGATGCGAGCCCGACGAGCCACTTGCGGTGAACTTCGCTTTCAAATTGTTCAGAATGCCAGACGAAAGCGTTTCCACGGAGAACCCGCGCGACGAGCTTCTCCGGCGCGTGAAGGGCTTGGCCCCGCGCATCGTGACACTAGTGGAGCAAGAGATGAACACCAATACGGCGCCGTTTACGTCCCGCGTGACCGAGACATGTTCATATTACGGCGCTCTGTTTGACTCGCTCGAGTCCACGATGCTTAGGGATAACTCGGACCGAGTCAAGCTGGAGAAAGGACTGAGTCAGAGGCTGACTAACGTAGTTGCTTGCGAAGGAAGAGATCGCGTGGAGAGATGCGAAGTGTTTGGGAAGTGGAGGGCGCGTATGAGAATGGCGGGGTTTCAGTCGAAACCCATGGATCAGAAAATCGCCGAGTCAATAAAGGCGCGACTCAACCAGGGGATCCGAGTCAACCCGGGGTTCACAGTGAAGGAAGAGAATGGTGGGATTTGCTTCGGTTGGATGGGTCGAACGCTCACCGTCGCATCTGCTTGGCGTTAA 1884 0.5122 MSSPGFTGGGLPEFYGGAGRSMATATMDDPSNTNLRPSHHPLYRRQQQQQLPPIFIDPYAQIARQNPSHIGKRTLAEFQTHQNHNNQVLSNLLLRSVKPRTFQNSSPMSPLSPMEFSMSPELLNSSSGFVSQRFGLPLLQQSRPQTMNLPNTTIPMSNSVLSKSGFPYSNTNCVHESEKKVMDHRLQELEKQLLEDNDEEEGDAVSGITSNKWSETIQNLISPGVLNQKPTSSSPTSSTTSTTSSSSSVPSPATTCSKQSLMEAASAISEGKSESATEILTQLAKLSNPNGNSDQRLTDYMVSALKLRLNPLENPPHVVELFSSEHAESTQLLYEYSPCFKVGFMAANLAILEASFEETENGNNKFRVVDFDIGEGNQYINLLHALSARQNGKPATVNITAVAEIGDEERLKTVGDKLRQQAEQLGFGFEFQIVNQKLTELTRESLGCEPDEPLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLAPRIVTLVEQEMNTNTAPFTSRVTETCSYYGALFDSLESTMLRDNSDRVKLEKGLSQRLTNVVACEGRDRVERCEVFGKWRARMRMAGFQSKPMDQKIAESIKARLNQGIRVNPGFTVKEENGGICFGWMGRTLTVASAWR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0783 627 ProSiteProfiles GRAS family profile. 248 627 IPR005202 -
Bisa01g0783 627 MobiDBLite consensus disorder prediction 222 269 - -
Bisa01g0783 627 Coils Coil 179 199 - -
Bisa01g0783 627 MobiDBLite consensus disorder prediction 1 35 - -
Bisa01g0783 627 Pfam GRAS domain family 258 627 IPR005202 -
Bisa01g0783 627 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 226 620 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0783 Bisa-ChrBisa01 12566635 12568518 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0783 48 627 GRAS Transcription Factor Family AT5G52510 49.674 1.04e-173 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa01g0783 GRAS 7.5e-108 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa01g0783 01 12566635 12568518 Bisa01g0783 01 12566635 12568518 ECH