Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0762 ATGCCCGAATCCCAGGAGGAAAATCCCGAGCTTCCTCCCAAGTCAAAGCTCGCGACGGAGGAAACTGTCATGGATTTCGATCTCGACCTGGAAAGTTCTTGGCCCTTAGATCAGATTGCTTTTGTCCCTAACCTTATGTCGCCTTTTCATATCTCCGCCTCCTCGGAGCAACCTTCTTCTCCTCTGTGGGTTTTCTCTGATTTAGACGACGAGAGGCACGCTAGGCTTGCCGCTTCAGCCTTCTCCGACGGTCATCGATTCTTTACCTGCAACTCAAATTCAGTAGCTGAAAAACCAGTAGAAAATGAGGAGAACAAAAAACTTATGTCACCCTTTGTGGCCCTGCCACCATTGGAAAATCCAGATGGTTATTGTCTAATAAAAGAAAGAATGACGCGAGCACTAAGGTACTTCAAAGAGTTGACTGAACAGAATGTACTTGCTCAAGTTTGGGCACCTGTGAGGATTGGGAACCAGTATGTGCTTACAACTTCAGGACAACCTTTTGTTCTTGATCCACATAGTAATGGACTCTATCAGTACAGAACAGTCTCTCTGCTGTACGCATTTTCTGTGGATGGGGAGAATGATGGAATCCTGGGACTTCCCGGTCGTGTTTTTCAGCAGAAATTACCTGAATGGACTCCCAATGTTCAATATTATTCTAGTAGAGAGTATCCACGCCGAAATCATGCTCAACATTATAATGTTCGTGGAACCTTGGCTTTGCCTGTGTTTGAACCTTCGGGGCAGTCTTGTGTTGCTGTACTGGAGCTGATAATGACTTCACAGAAGATTAACTATGCTCCTGAGGTTGATAAAGTCTGCAAAGCTCTTGAGGCAGTAAATTTGAAGAGCTCAGAAATTTTGGAACATCCATACGCCCAGATTTGTAATGAAAGCCGCCAGAATGTATTAGCCGAGATTTTGGAGATATTGACCGTGGTGTGTGAAACTCATAAATTACCTCTGGCCCAAACATGGGTTCCCTGTAGGCATCGGAGTGTTCTGGCCCATGGTGGTGGCCTGAAGAAAAGTTGCTCTAGCTTTGACGGTAGTTGCATGGGGCAAGTTTGCATGTCTACTACTGATGTTGCTTTCTATGTCATAGATGCTCATATGTGGGGTTTCCGTGAAGCCTGTGTTGAGCATCACCTACAACAAGGTCAAGGGGTTGCTGGGAGGGCATTTTTGTCTGGCAATATGTGCTTCTGTGGAAACATCACCCAGTTCTGCAAAATTGAGTACCCCTTAGTGCATTATGCTCTTATGTTTGGGTTAACCAGCTGTTTTGCAATCTGCTTACAAAGCTCCCATACTGGAAATGATGATTACATATTAGAATTTTTTCTGCCTCCTAGGATCATAGACTTTAATGAACAGAAGACTTTGTTGGGATCTATATTAGCAACAATGAAACAGCATTTCCAGAGTCTTAAACTTGCTGCTGGTATTGAACTTGAGGAGCAAGGTTCAGTTGAAATAGTTGAAGCGGAAAATGAAAGAGTTTGTTCAAGGCTTGAGTCTATTCCAATTACCCAACCTGGTAAATCGCCGCCTGGACCTGATGCCTCTCCAAATATGGGGGATATGGTGCCACTGGATTCATCAGAGCAGCAAATAATGATGCCCTATGATGATATAAATGGTGGAGGGACTCTTGGTGATAATGCTGGTGGAAACTTTGATCAGATCTCTTCGTTGGAGACTAAAAACATAAAGAAACCCTCAGAGAGAAAACGGGGAAAAACTGAGAAATCAATTAGTCTTGAAGTTTTGCAACGTTATTTTGCTGGGAGTCTTAAAGATGCTGCAAAAAGCCTTGGTGTTTGTCCTACTACAATGAAGCGTATCTGTAGGCAGCATGGGATATCCCGTTGGCCATCTCGAAAGATCAACAAGGTTAATCGTTCCCTGTCTAAGCTCAAGAGGGTCATTGAATCTGTCCAAGGTGCTGAAGGAACGTTTGGCTTGAATTCTCTTGGCACAAATCCACTTCCAGTGGCTGTTGGTTCCATTCCCGAGCCTTCTACTTCAAATAAATTTAGCCAACGGCCCTCATTTAGCACTCGCACCACTGAACCTCAGACAAAAGAGAATGAGTTTCGTGCCTCCAACATATCAGAAACAAACAGACAGGCTGGGATGGAACATCAATTGCATGGAGGAAGGATACAAAGTCCTGAGCTCGTAATACATGGTAAAATTGGGTCCAGTCAGGAGTTTGGTAAAGGCCTGGACGCATTTAGAACCAGGAGTGGCTCAAGCGAAGATAGTGCGAACCCTACTTCTCATGGCTCATGCCATGGTAGCCCCCCAAATGAAAGTTCGCCTGCAAAAGATATATTCATTACAACTAACAATAAGCAATGTGTCGCAGTTGGGGGATCACCAGAATTGACACCGCAGCCAACTAGTAAACTGAACAGTTCACCCGTATATGCGATGCCTGATGTTGTGGTCGCTGAACTTCAAGAGCCATTTGGAGGGATGCTAATAGAGGATGCTGGTAGTTCCAAGGACTTGAGAAATCTGTGTCCTTCAGCAGCCGATGCCAATTTGGAGGATCAGGTACCAGAAGCTTGTGGGGCTATTGCTCCATCTTCTGACTTGGGTCCCAAGCATTGCATCAATGCTTTTGGCAATACGATGACACCTTTTGCAGCTTGGAAAGAAATGAAGTGTGTGACTATAAAAGCAACATATAGAGAAGATATCATTCGGTTTCGGATCTCTTTCACCGCTGGCATTGTGGAACTGAAAGAAGAAGTTGCCAAAAGACTGAAACTAGAGGTGGGAACATTTGATATCAAATACCTGGATGATGATCATGAATGGGTTTTGATGGCCTGTGATGCAGACCTTCAGGAGTGCATGGATCTTTCAAGATCATCAGGTGGTAACATAATAAGGCTCTTGGTGCATGATATAGCATCCCATCTTGGAAGCTCCTGTGAGAGCTCAGGGGAGTGA 2973 0.445 MPESQEENPELPPKSKLATEETVMDFDLDLESSWPLDQIAFVPNLMSPFHISASSEQPSSPLWVFSDLDDERHARLAASAFSDGHRFFTCNSNSVAEKPVENEENKKLMSPFVALPPLENPDGYCLIKERMTRALRYFKELTEQNVLAQVWAPVRIGNQYVLTTSGQPFVLDPHSNGLYQYRTVSLLYAFSVDGENDGILGLPGRVFQQKLPEWTPNVQYYSSREYPRRNHAQHYNVRGTLALPVFEPSGQSCVAVLELIMTSQKINYAPEVDKVCKALEAVNLKSSEILEHPYAQICNESRQNVLAEILEILTVVCETHKLPLAQTWVPCRHRSVLAHGGGLKKSCSSFDGSCMGQVCMSTTDVAFYVIDAHMWGFREACVEHHLQQGQGVAGRAFLSGNMCFCGNITQFCKIEYPLVHYALMFGLTSCFAICLQSSHTGNDDYILEFFLPPRIIDFNEQKTLLGSILATMKQHFQSLKLAAGIELEEQGSVEIVEAENERVCSRLESIPITQPGKSPPGPDASPNMGDMVPLDSSEQQIMMPYDDINGGGTLGDNAGGNFDQISSLETKNIKKPSERKRGKTEKSISLEVLQRYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKINKVNRSLSKLKRVIESVQGAEGTFGLNSLGTNPLPVAVGSIPEPSTSNKFSQRPSFSTRTTEPQTKENEFRASNISETNRQAGMEHQLHGGRIQSPELVIHGKIGSSQEFGKGLDAFRTRSGSSEDSANPTSHGSCHGSPPNESSPAKDIFITTNNKQCVAVGGSPELTPQPTSKLNSSPVYAMPDVVVAELQEPFGGMLIEDAGSSKDLRNLCPSAADANLEDQVPEACGAIAPSSDLGPKHCINAFGNTMTPFAAWKEMKCVTIKATYREDIIRFRISFTAGIVELKEEVAKRLKLEVGTFDIKYLDDDHEWVLMACDADLQECMDLSRSSGGNIIRLLVHDIASHLGSSCESSGE 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0762 990 FunFam RWP-RK domain-containing protein 892 976 - -
Bisa01g0762 990 MobiDBLite consensus disorder prediction 556 582 - -
Bisa01g0762 990 MobiDBLite consensus disorder prediction 673 711 - -
Bisa01g0762 990 Pfam RWP-RK domain 587 635 IPR003035 -
Bisa01g0762 990 ProSiteProfiles PB1 domain profile. 895 977 IPR000270 GO:0005515
Bisa01g0762 990 ProSiteProfiles RWP-RK domain profile. 574 655 IPR003035 -
Bisa01g0762 990 MobiDBLite consensus disorder prediction 670 711 - -
Bisa01g0762 990 CDD PB1_NLP 896 976 IPR034891 -
Bisa01g0762 990 Gene3D - 893 976 - -
Bisa01g0762 990 PANTHER PROTEIN NLP8 54 989 IPR045012 GO:0003700
Bisa01g0762 990 Pfam PB1 domain 896 976 IPR000270 GO:0005515
Bisa01g0762 990 MobiDBLite consensus disorder prediction 749 781 - -
Bisa01g0762 990 MobiDBLite consensus disorder prediction 752 781 - -
Bisa01g0762 990 SMART PB1_new 895 977 IPR000270 GO:0005515
Bisa01g0762 990 SUPERFAMILY CAD & PB1 domains 893 981 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0762 Bisa-ChrBisa01 12075815 12080069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0762 261 990 NLP Transcription Factor Family AT4G24020 55.210 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Bisa01g0762 PB1 5.9e-17 CL0072