Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0714 ATGTTTCCTTTACAACGAGGCAATGAGATGGTGATCCAATTTTCTGGCTGTCCCCACTATCACCAACACCAAATCTCCGAAGATCTCATTCTTGATGGCCATTCTCATGCTTCTCAGGAGGATATGATCAGTTTTTCTGATAAAAAATCACATGGTGGCAGAACTAGCACCAGCCGGCCGAAGAAACTTCAATATGGGTCTTGCGATGATCAGATTAATCATGAGATTTCTAATGACAAGCACAAGAAGAACAAGAAGATCGTTCATAGGGAGATTGAGAGGCAAAGAAGGCAAGAAATGGCTACCCTTTATGCCTCCCTTAGATCTCATCTCCCTCTTGAGTTCATCAAGGGAAAGCGTTCGATATCAGATCACATGAACGAGGCGGTGAACTACATAAAGCACCTTGAGAAGAATATAAAAGAACTGAGTGCCAAGAGAGATGAATTGAAGAAACTCTCCAACAATTCTTCAAATCCCGAAAACCATGAGAGCGAAAGCGAACAGTATACATCATCTAACAGCTTTTTTAGTGTCCGCGAGCTCAATGATAATGGGGGTGTGGGAATTGAGGTTTCTAGTGGCTTCAGAGAGGAAAGGCTTCGCCTTTCGAAATTGTTGGAACTAATGCTCGAAGAAGGACTTGGAGTTGTTACTTGTGTTTCCTCACAAGTCAATGGAAGATTAATTCACTGTGTTCAGTGTGAGGTTAACAATTCCGATGGTGTAGATCTACCTGCGCTGAGAGGGAAAATTTCCAATGCGGTTCCATCATTTAGATGTTCAGATTATTAG 795 0.4214 MFPLQRGNEMVIQFSGCPHYHQHQISEDLILDGHSHASQEDMISFSDKKSHGGRTSTSRPKKLQYGSCDDQINHEISNDKHKKNKKIVHREIERQRRQEMATLYASLRSHLPLEFIKGKRSISDHMNEAVNYIKHLEKNIKELSAKRDELKKLSNNSSNPENHESESEQYTSSNSFFSVRELNDNGGVGIEVSSGFREERLRLSKLLELMLEEGLGVVTCVSSQVNGRLIHCVQCEVNNSDGVDLPALRGKISNAVPSFRCSDY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0714 264 Gene3D - 75 165 IPR036638 GO:0046983
Bisa01g0714 264 MobiDBLite consensus disorder prediction 152 172 - -
Bisa01g0714 264 CDD bHLH_AtORG2_like 85 161 - -
Bisa01g0714 264 MobiDBLite consensus disorder prediction 155 172 - -
Bisa01g0714 264 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 84 136 IPR011598 GO:0046983
Bisa01g0714 264 FunFam Transcription factor bHLH126 76 164 - -
Bisa01g0714 264 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 70 253 - -
Bisa01g0714 264 SMART finulus 90 142 IPR011598 GO:0046983
Bisa01g0714 264 Pfam Helix-loop-helix DNA-binding domain 85 137 IPR011598 GO:0046983
Bisa01g0714 264 Coils Coil 78 98 - -
Bisa01g0714 264 MobiDBLite consensus disorder prediction 44 65 - -
Bisa01g0714 264 Coils Coil 126 156 - -
Bisa01g0714 264 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 81 151 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0714 Bisa-ChrBisa01 11173115 11174370 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0714 89 252 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 47.904 1.12e-41 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g0714 HLH 1.2e-10 No_clan