Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0712 ATGGACAGAGGGAAGAATCATCATAATATGTGGGCTTCTTGGGACAATAATGATGAAGCAAATGTTAGTAATAAAGAGATGAAGAAGATCATTCGTAGGGAAACTGAAAGGCAAAGAAGGTCGCATATGACGACCCTATGTCAATCACTCCGATCTTTGCTCCCTTCTGAACTCATCAAGGGAAAGCGTTCAGTGTCTGATCACATAGGGGAGGCAGCAAATTATATCAAAGATTTGGAGGAGAAAACCCAAAAACTCCAAATTAAGAGAGATAAGCTCAGAAATGAGTCTAATTCGAGTTTGGTTGCTGCTGGAATTGAAAGTTCAAATCATTCGAACATGGTAAAATGTGTAAGCATTTCGCCTTTTTTGGGTGGCCTGGAAATTTCTATGGACAGTGGCTTGGAGGAGAACAGCTTTCCTCTCTCACTTCTGCTGGAAATATTAATCCAAGATGGATGTAATGTTGTGAGCTGTGTGTCTTCCCAAGTGAACGGGAGGCTGTACCACTCTATTAAGACTGAGATGGATAACTTGGGAGGCCTTGATCTTGCTGGGTTGGAACAGAAACTGAATGATGCCATCTTGTGGTCGAGGGTTGAAGGCATAGAGGAGAGGAGAATTCTTCAGAAGCAAATTGCTTGCAAAATACAGGAATATTGTGGGACAGAAGTATTGATCATGCATGATGATGATCAGACTTTACTCTTCGATCCTTAA 720 0.4153 MDRGKNHHNMWASWDNNDEANVSNKEMKKIIRRETERQRRSHMTTLCQSLRSLLPSELIKGKRSVSDHIGEAANYIKDLEEKTQKLQIKRDKLRNESNSSLVAAGIESSNHSNMVKCVSISPFLGGLEISMDSGLEENSFPLSLLLEILIQDGCNVVSCVSSQVNGRLYHSIKTEMDNLGGLDLAGLEQKLNDAILWSRVEGIEERRILQKQIACKIQEYCGTEVLIMHDDDQTLLFDP 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0712 239 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 27 79 IPR011598 GO:0046983
Bisa01g0712 239 Coils Coil 72 99 - -
Bisa01g0712 239 SMART finulus 33 85 IPR011598 GO:0046983
Bisa01g0712 239 Pfam Helix-loop-helix DNA-binding domain 32 80 IPR011598 GO:0046983
Bisa01g0712 239 CDD bHLH_AtORG2_like 28 98 - -
Bisa01g0712 239 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 24 98 IPR036638 GO:0046983
Bisa01g0712 239 Gene3D - 18 105 IPR036638 GO:0046983
Bisa01g0712 239 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 24 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0712 Bisa-ChrBisa01 11147679 11149797 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0712 33 198 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 38.728 6.73e-32 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa01g0712 HLH 2.4e-07 No_clan