LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa01g0707	ATGTCTCTCTTTTCTTTCTCGCATCCCATTCGCTTTTGGGGAACCACACTCGCATTCTCACTATATTTCTTGTATTACATCTCAAATTCCACCTCAAATCCAACCCAAACACCCTGTTCCAAAATGGATGCCTATCACAAGCTCCACGTCGTCCTCAACCCCAACGGCACCCTCACTCGCTTAAACATCCCTCCCGTAAGCCCTCCCTCACCTGATCCTACCCTCCCCATTCCCGTTCTCTCCAAAGATCTCCCCATCAACACTTCCAAAAACACCTGGCTTCGCATTTTCCTTCCCCGCAAAGCTCTCCATCATAACAAGAAGCTCCCTCTTATCGTCTTCTTCCACGGTGGCGGCTTCGTCCTTCTCAGCGCAGCCTCTACCATGTTCCACAATTTCTGCCTCAACATGGCCCACGATCTCAACGCCGTCGTCGTCTCCGTCGAGTACCGCCTCGCTCCGGAGCACCGCTTGCCGGCGTCCTACGACGACGCCATGGACGCGCTGCACTGGATCAAAACCCGTCGGGATCGTTGGTTGACTCAGCACGCTGATTATTCCGTGTGTTATCTAATGGGAAGCAGCGCGGGGGGAAACATCGCGTACCACGCGGGTCTACGTGCAACCGCGGAGGTTGATGATCTGGAGCCTTTGAAGATCGGAGGGCTGATATTGGTTCAACCGTTTTTCGGTGGGACCCGGAGGAGTGGTTCAGAGGTGAGGGTGATGAATGACCCGTTTCTGTCGTTATGTGTGACTGACCTGTTGTGGGAGTTGTCGTTGCCCGTAGGAGGTGACCGTGATCACGAGTATTGCAATCCGAGGGCTGGAAATGCTTGGGAGAAAATGGAGAGGATGGGACGGTTGGAGTGGCGAGTGTTGGTGACAGGGTGCAGTGGGGACCCACTGGTGGACCGACAGGTGGAGGTGACGAAGATGATGGAGGAGAGGAATTTGAAAGTGGTGGGCCACTTTACTGAGGGAGACTCTCACGGGATTCAGGATCGTGATCCCTTGAAAGCTAAGGAACTTTATGAGGTGGTTAAGAATTTTATCTCATCTTTGGCTTCTGATGTCTGA	1080	0.5315	MSLFSFSHPIRFWGTTLAFSLYFLYYISNSTSNPTQTPCSKMDAYHKLHVVLNPNGTLTRLNIPPVSPPSPDPTLPIPVLSKDLPINTSKNTWLRIFLPRKALHHNKKLPLIVFFHGGGFVLLSAASTMFHNFCLNMAHDLNAVVVSVEYRLAPEHRLPASYDDAMDALHWIKTRRDRWLTQHADYSVCYLMGSSAGGNIAYHAGLRATAEVDDLEPLKIGGLILVQPFFGGTRRSGSEVRVMNDPFLSLCVTDLLWELSLPVGGDRDHEYCNPRAGNAWEKMERMGRLEWRVLVTGCSGDPLVDRQVEVTKMMEERNLKVVGHFTEGDSHGIQDRDPLKAKELYEVVKNFISSLASDV	359

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa01g0707	359	SUPERFAMILY	alpha/beta-Hydrolases	54	354	IPR029058	-
	Bisa01g0707	359	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative histidine active site.	112	128	IPR002168	GO:0016787
	Bisa01g0707	359	Gene3D	alpha/beta hydrolase	45	357	IPR029058	-
	Bisa01g0707	359	Pfam	alpha/beta hydrolase fold	112	333	IPR013094	GO:0016787
	Bisa01g0707	359	PANTHER	ARYLACETAMIDE DEACETYLASE	50	331	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa01g0707	Bisa-ChrBisa01	11089757	11090836	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa01g0707	55	352	Carbohydrate Esterase	AT5G16080	33.866	2.15e-50	170