Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0688 ATGGATGTTGCTAGGAGCAACAGCAGCTCTGAACCTTCAACTTCTTGCAGTTGTTATAAAGTAGAAAGTCTCACTGAAACGATACTGGACACAGAGCAGACTGCAAATTTGAAAGATCGGTATGTTCTTGGCGAGCAGTTGGGTTGGGGACAGTTTGGTGTTATTAGATTGTTGACTGACAAGCTGACTGGAGAGGATTTTGCCTGCAAATCAATTGCTAAGGATAGATTGGTTACTTCAGATGATCTACGAAGTGTCAAACTTGAGATTGAGATAATGTCTAGGTTATCAGGGCACCCAAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAAGATTTTGTTCATCTGGTGATGGAGCTTTGTGCTGGAGGTGAGCTGTTTCACCGGCTAGAGAAGCACGGACGATTTTTTGAATCTGAAGCCAGGGTTCTGTTTAGGCACCTGATGCAGGTGGTTTTGTATTGTCATGAAAATGGTGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACAAGAGCCTCTTCATCTCCAATTAAATTGGCAGATTTTGGGCTTGCAACCTACATCAAGCCTGGACAAAGTTTGCATGGGTTAGTAGGGAGTCCATTCTATATAGCTCCAGAGGTACTTGCAGGTTCATATAACCAGGCTGCTGATGTTTGGAGTGCAGGTGTGATACTTTACATTCTATTGAGTGGGATGCCTCCATTTTGGGGGAAGACCAAGTCAAAGATATTTGAAGCTGTTAAGGCTGCTGACTTGAGGTTTCCATCTGAACCTTGGGATCACATTTCTAAATCAGCGAAGGATTTGATCAAGGGAATGCTCTGCATAGATCCCTCTCGAAGGCTCACAGCTCAGCAGGTTTTAGATCATTGCTGGATGGAGAGCAACCAAACAAGTCTTGAACAACCAAATGAACATGACATCCAAAGTTGCAGGGAATGGGATGTTGGTGACAGCTCATTCTCTGCACCCTTCATGACCAGGAATCAGGACATCAGCTTTGGCGCTGAATCTCCTATATGTGATGCTCAGTCGCCTACTTTCACATGCAGATCATCGTTTTCTTCTTTTTTGGTGGAATCATCGACTCCTTGTTCAGCGTCAGGGGGGTTTTCATTTCATGATGTTGGTGGTTCTAGTGGTTTGGAATTCTCTTCTCCTGTTACTTCGATGCCTAGCTTTGCATTTCTCAGCCCCAATTCCGATGTTGAGAAAAGGAGTTGTACATTAGAGATCTCAACTAACACATCAAATGTAAAGACAATCACTGAAGAAGCAAGCCTGGGAAAATTGCTTCTACTTCCAGATTCTGCCCTTAGTTTTGGACCTGATGATAAAATGCTGAATCGCAAGCCGGTGGAGAGTAAGAGGGCAGGTGGTACGAATGGACATAGGGTTTTGGGAATCCACAGCAAGAGAAATCGAACGATTGGACTTGGTGAACGTGAGCAACTGGACCTTGTGGTTACTGAATCAGTCATTCGTTGGTCATCATGCACGCAGCTACCAACGACCCTTAGGTCATCTCTTGTCTGTTAA 1557 0.4399 MDVARSNSSSEPSTSCSCYKVESLTETILDTEQTANLKDRYVLGEQLGWGQFGVIRLLTDKLTGEDFACKSIAKDRLVTSDDLRSVKLEIEIMSRLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHRLEKHGRFFESEARVLFRHLMQVVLYCHENGVVHRDLKPENILLATRASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGSYNQAADVWSAGVILYILLSGMPPFWGKTKSKIFEAVKAADLRFPSEPWDHISKSAKDLIKGMLCIDPSRRLTAQQVLDHCWMESNQTSLEQPNEHDIQSCREWDVGDSSFSAPFMTRNQDISFGAESPICDAQSPTFTCRSSFSSFLVESSTPCSASGGFSFHDVGGSSGLEFSSPVTSMPSFAFLSPNSDVEKRSCTLEISTNTSNVKTITEEASLGKLLLLPDSALSFGPDDKMLNRKPVESKRAGGTNGHRVLGIHSKRNRTIGLGEREQLDLVVTESVIRWSSCTQLPTTLRSSLVC 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0688 518 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0688 518 MobiDBLite consensus disorder prediction 451 472 - -
Bisa01g0688 518 CDD STKc_CAMK 40 298 - -
Bisa01g0688 518 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bisa01g0688 518 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0688 518 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Bisa01g0688 518 PANTHER SERINE/THREONINE-PROTEIN KINASE 26 308 - -
Bisa01g0688 518 FunFam Calcium-dependent protein kinase 1 43 126 - -
Bisa01g0688 518 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Bisa01g0688 518 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Bisa01g0688 518 SUPERFAMILY Protein kinase-like (PK-like) 38 374 IPR011009 -
Bisa01g0688 518 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa01g0688 518 Gene3D Transferase(Phosphotransferase) domain 1 128 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0688 Bisa-ChrBisa01 10682192 10684864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0688 25 309 EF-hand Containing Proteins AT5G04870 51.930 5.19e-98 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bisa01g0688 Pkinase 1.2e-71 CL0016