Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0684 ATGTTTTCCTTCACTCACTCTTCAGACCCACATCGGTTTAGGTCGGGGTATAGCGAGTTAGACGCGCTGTACACGTCGTCGCCGGCGTCGGATAGTTGCAGCGGCGCCGGAGTTCGATCGGGGGCTTTGTCGGACGAGGAGGTGTTGTTGGCCGCAAGTCACCCGAAGAAGCGCGCCGGGAGGAAGAAGTTCCGGGAGACTCGCCACCCGGTGTTTCGGGGTGTTCGCAGGAGGAACTCCGGAAAGTGGGTGTGCGAAGTGCGTGAGCCCAATAAGAAGACAAGGATTTGGCTGGGGACGTTTCCGACGGCGGAGATGGCAGCTCGGGCTCACGATGTGGCGGCAATGGCGCTCCGGGGTCGGTCCGCTTGTCTTAACTTTGCGGACTCGCTGTGGCGATTGCCGGTCCCGGCGTCTTCTGAGGTGAAGGATATTCAGAAGGCGGCAGCAGAAGCGGCGGAGGCGTTCCGGCCGGGGATGGAATCGGAAACCGATGAGGCGAGGCGGGAGAATGCAGAGGCGGCGACGAAAACGGTGGCCGCGGTGGTGGAGGAGCAAAGTGTATTCTATATGGATGAGGACGATGGAGTTTTGGGGATGCCGGAAATGTTGAGGAACATGGCGGACGCTGTGCTGATGTCGCCACCTCATAGCTTCGGGGAAGAGTATAGTGGCGCTGACGTGGAAGTGGATGATGCTGAACTGTCATTATGGAGTTACTCAATTTAA 729 0.5871 MFSFTHSSDPHRFRSGYSELDALYTSSPASDSCSGAGVRSGALSDEEVLLAASHPKKRAGRKKFRETRHPVFRGVRRRNSGKWVCEVREPNKKTRIWLGTFPTAEMAARAHDVAAMALRGRSACLNFADSLWRLPVPASSEVKDIQKAAAEAAEAFRPGMESETDEARRENAEAATKTVAAVVEEQSVFYMDEDDGVLGMPEMLRNMADAVLMSPPHSFGEEYSGADVEVDDAELSLWSYSI 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0684 242 Pfam AP2 domain 70 120 IPR001471 GO:0003700|GO:0006355
Bisa01g0684 242 CDD AP2 72 130 IPR001471 GO:0003700|GO:0006355
Bisa01g0684 242 ProSiteProfiles AP2/ERF domain profile. 71 128 IPR001471 GO:0003700|GO:0006355
Bisa01g0684 242 Gene3D AP2/ERF domain 71 129 IPR036955 GO:0003700|GO:0006355
Bisa01g0684 242 FunFam Ethylene-responsive transcription factor 2 70 129 - -
Bisa01g0684 242 PRINTS Ethylene responsive element binding protein signature 72 83 IPR001471 GO:0003700|GO:0006355
Bisa01g0684 242 PRINTS Ethylene responsive element binding protein signature 94 110 IPR001471 GO:0003700|GO:0006355
Bisa01g0684 242 SMART rav1_2 71 134 IPR001471 GO:0003700|GO:0006355
Bisa01g0684 242 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 30 240 IPR045277 GO:0003700
Bisa01g0684 242 SUPERFAMILY DNA-binding domain 71 130 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0684 Bisa-ChrBisa01 10602462 10603190 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0684 50 240 AP2-EREBP Transcription Factor Family AT4G25470 61.979 2.33e-73 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g0684 AP2 2.7e-15 CL0081