Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0683 ATGTATAGCAACCCTCCCCCAGGAAACGTGACTCAAGAAGACCAACCGCCTACTTTACAATCTCAAGATTCTTCGTCCTCTACCACACCATTGCCGTCTCCCCGTGGGTCGTCGTCGTCGTCTTCTCCGGCACAGCATGCCAGCAGGAGGCACGCCACCTTCAGGGGGATCCGGAGCCGAAGCGGCAAATGGGTGTCCGAGATACGGGAGCCACGTAAAACCACGCGCATTTGGCTAGGCACCTACCCCACGCCTGAGATGGCCGCAGCCGCCTACGACGTCGCGGCTCTCGCATTGAAGGGCCCTGACACCCTCCTCAACTTCCCCAATTTGATCCTCTCATACCCGATCCCGGCCTCATTATCCCCCACCGATATCCGGGCGGCCGCGGCCGCTGCTGCCGAGGTGAAGCTAGTGAGGCCGGCCGCGGAAGCCACCGCGCAAGGAGGAACCCGACCTGAGAATGTTGAGGGTGGCTCCTGTACCGAAGGTGCCGAGAAAAGCCAGGAATTTATCGACGAGGATGAGCTATTGAACATGCCGAATTTGCTGGAGGATATGGCGAGGGGAATGCAGGTGAGTCCCCCCAGGATGAAGTCGCCGTCTTCCGATGAGTCGCCGGGCAATTCAGACGGAGATAGTCTTTGGAGTTTTTAG 657 0.5906 MYSNPPPGNVTQEDQPPTLQSQDSSSSTTPLPSPRGSSSSSSPAQHASRRHATFRGIRSRSGKWVSEIREPRKTTRIWLGTYPTPEMAAAAYDVAALALKGPDTLLNFPNLILSYPIPASLSPTDIRAAAAAAAEVKLVRPAAEATAQGGTRPENVEGGSCTEGAEKSQEFIDEDELLNMPNLLEDMARGMQVSPPRMKSPSSDESPGNSDGDSLWSF 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0683 218 Pfam AP2 domain 55 101 IPR001471 GO:0003700|GO:0006355
Bisa01g0683 218 ProSiteProfiles AP2/ERF domain profile. 53 109 IPR001471 GO:0003700|GO:0006355
Bisa01g0683 218 SMART rav1_2 53 115 IPR001471 GO:0003700|GO:0006355
Bisa01g0683 218 MobiDBLite consensus disorder prediction 144 218 - -
Bisa01g0683 218 MobiDBLite consensus disorder prediction 1 48 - -
Bisa01g0683 218 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 37 192 - -
Bisa01g0683 218 MobiDBLite consensus disorder prediction 1 66 - -
Bisa01g0683 218 MobiDBLite consensus disorder prediction 196 218 - -
Bisa01g0683 218 CDD AP2 54 111 IPR001471 GO:0003700|GO:0006355
Bisa01g0683 218 Gene3D AP2/ERF domain 53 110 IPR036955 GO:0003700|GO:0006355
Bisa01g0683 218 FunFam Ethylene-responsive transcription factor 2 52 110 - -
Bisa01g0683 218 SUPERFAMILY DNA-binding domain 54 110 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0683 Bisa-ChrBisa01 10590864 10591520 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0683 48 218 AP2-EREBP Transcription Factor Family AT5G52020 59.091 5.15e-54 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa01g0683 AP2 2.6e-10 CL0081