Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0680 ATGGCGGATGGTACTGAAAGTGGTTGTGAGAGATTTGATATATCTGTGTTAGTGGTGGACGATGATACCACTACTCTCTCAGTCATCTACGGCATTCTCAGATCATGGGAATACCAAGTGATGACTGCTACCAACGGCCATGAAGCTTTGAAGACTCTTCGGGAGTTCAGAGGTATTATCGACATCGTTATCACTGACCTTCATATGCGAGGAATGAATGGATTCGAACTGCAGAAGCTAGTCAAACAAGAATTCAACCTCCCCGTAATCATGATGTCTGCAGACAGCAGGAAGAGTGTGATGTCCAATAGTTTAGCAAGTGGAGCTGTATTTTACATAGTAAAACCAGTCAACAGAGATGACTTCAAGGACATATGGCAGTATGCTGTGGCTGCTAGGAAGCAAAACTCAGCTCTTGATCTTCAATTTCTGGGAAACAAAGGAGGAGTGTCGTCATCATCTGCAGGTGAAAAGAGCGTGGCCTCTGAGGATGCGAATGCTATTGCACCATTTTTGGCAGTGAGTGAGCCAAAGCGAAGGAGAAAGTATAGAAAGAGAAAAGGTGGTCCGTTGGAGCCTCGAAGTCCAAAGAAGCCAAAGGTTGTTTGGAGTACAACGCTTCACAATCGCTTCTTGCTGGCCATAAGACAAATTGGGTTAAACAAGGCTGTTCCAAAGAAGATTCTGGAGATCATGAACGTGCCAGGTTTGACGAGAGAAAACGTTGCCAGTCATTTGCAGAAGTATCGCATATTTCTGAGAAGAGTTGCGGAGAAGGGAATACTGGAAGGGTTATCAGAGAGAGCCTTAAGGTCAAGATTCGCCTCTGGCCTCCCCACTTCTCTCATCCAAAGCGTCCAAAGGAGAATTGCGCATTTCCGTCTTCATCATCATCACCAGCCTCAACCTGCTATCTCTCATACAGCCACCCCCACCACCGCCACCACTACTAGTACTACTACTGCTATCTCTCTGCCTCAACTTCCCTATAATCCTTCAACCACCACCACTACGACTGATACTATCTCTCCAACTTCCAACAGAGCCTCTCTCATCAATCAGGTCAGACTTGGACAACCAAACTACTTTGGGATTGGGACCTCTCAGTCTCATCATACTAATTACTCTCAACCAACTCAATACCGTCCCTTCTTGCCAGCGTACAACAGAAATGGAGGCTTCTTGACTTCTGCAAATGCCCTCCCTGGAAATCAGTCTATGACTATGACTGACTATGCTACTGCTTCTTTGGGGCTTAATAACATTAACAGCACCTTCAACTTCAACTATGTCTCAGGCATTAATAATATCAACAACAACAATGAGAGGTCGTTCGTGCCTTCTGGAAGTTCAAGTGCTAACTACAGCTACCCGACAAGTAATTATAATCACTCTGCATATCAACTGAACAATAATGCATCTCTTGTGCCTGCTGGGAGGTATCAGACTCGGAGCGTTGGCTATACAGGAAACAACAACATCATCATCAACGACAACACATTTGGCCTAATCAGTAATGGGAGTTTTGGAAATAATGCAAATGTGTCTGCAACTTCATCAATATTCAATAATGTCCCTGCAGAGTCATGCGCTCCAGGAAATATTTCAGCGCTTCTTCCACCTTTGACTCAGCACTCAAGTAATGGTAATGGGAAGGCTGGAGATGACGTGCAGCATCAGCTTAATAATAATAGTACTGTCAATTCATTGAGTGAGAGAGAGGCCTCCCAATTGGATGAAAACCTTACTGATCTTTTCCTCATGATGCACGACATGCATCTTCTTAATCAGACAGGACAGAACCCTCGAAGTGAACTTTTGAATTCTGACATTCTTAGCCCCTTCCATGTTGAACAGTGCCTTGAGCAGTTTCAGTTACCTAGTGATCATGTGACTGTGAGTACTCCCACAAGTGAAGGCAGCAGTATTAATGTATTAACAAGCAAGTCCCCAGTTGGCGCCGATGAAAGCTCTAATCAGGATTGGGATATGGAACTCATTGAATCACTGTTCGGCACTGTAAATTCAAACCAGAAGGAATGA 2043 0.444 MADGTESGCERFDISVLVVDDDTTTLSVIYGILRSWEYQVMTATNGHEALKTLREFRGIIDIVITDLHMRGMNGFELQKLVKQEFNLPVIMMSADSRKSVMSNSLASGAVFYIVKPVNRDDFKDIWQYAVAARKQNSALDLQFLGNKGGVSSSSAGEKSVASEDANAIAPFLAVSEPKRRRKYRKRKGGPLEPRSPKKPKVVWSTTLHNRFLLAIRQIGLNKAVPKKILEIMNVPGLTRENVASHLQKYRIFLRRVAEKGILEGLSERALRSRFASGLPTSLIQSVQRRIAHFRLHHHHQPQPAISHTATPTTATTTSTTTAISLPQLPYNPSTTTTTTDTISPTSNRASLINQVRLGQPNYFGIGTSQSHHTNYSQPTQYRPFLPAYNRNGGFLTSANALPGNQSMTMTDYATASLGLNNINSTFNFNYVSGINNINNNNERSFVPSGSSSANYSYPTSNYNHSAYQLNNNASLVPAGRYQTRSVGYTGNNNIIINDNTFGLISNGSFGNNANVSATSSIFNNVPAESCAPGNISALLPPLTQHSSNGNGKAGDDVQHQLNNNSTVNSLSEREASQLDENLTDLFLMMHDMHLLNQTGQNPRSELLNSDILSPFHVEQCLEQFQLPSDHVTVSTPTSEGSSINVLTSKSPVGADESSNQDWDMELIESLFGTVNSNQKE 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0680 680 Gene3D - 195 257 - -
Bisa01g0680 680 CDD REC_typeB_ARR-like 16 130 - -
Bisa01g0680 680 PANTHER TWO-COMPONENT RESPONSE REGULATOR 15 358 IPR045279 GO:0009736
Bisa01g0680 680 MobiDBLite consensus disorder prediction 178 199 - -
Bisa01g0680 680 SUPERFAMILY CheY-like 14 136 IPR011006 -
Bisa01g0680 680 NCBIfam myb-like DNA-binding domain, SHAQKYF class 198 251 IPR006447 GO:0003677
Bisa01g0680 680 SMART REC_2 14 126 IPR001789 GO:0000160
Bisa01g0680 680 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 195 254 IPR017930 -
Bisa01g0680 680 MobiDBLite consensus disorder prediction 631 657 - -
Bisa01g0680 680 ProSiteProfiles Response regulatory domain profile. 15 130 IPR001789 GO:0000160
Bisa01g0680 680 MobiDBLite consensus disorder prediction 324 345 - -
Bisa01g0680 680 Gene3D - 15 186 - -
Bisa01g0680 680 FunFam Two-component response regulator 194 257 - -
Bisa01g0680 680 Pfam Myb-like DNA-binding domain 201 250 IPR001005 -
Bisa01g0680 680 Pfam Response regulator receiver domain 16 124 IPR001789 GO:0000160
Bisa01g0680 680 SUPERFAMILY Homeodomain-like 196 255 IPR009057 -
Bisa01g0680 680 MobiDBLite consensus disorder prediction 631 661 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0680 Bisa-ChrBisa01 10551905 10558254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0680 14 274 Response Regulator Gene Family AT5G07210 41.259 7.04e-57 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa01g0680 Response_reg 9.3e-23 CL0304