Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0679 ATGATTTCAGGTAGGTGTGCAGCTTGTAAGAATCAAAGAAGAAGATGCCCTTCGGATTGTATTTTCTCTCCCTATTTTCCTGCCAATGATCCTCAAAGATTTGCTTACGTTCACAGAATATATGGTGGCAACAATGTTGGAAAAATGCTTCAGCAAATCCCAAGCTATGTGAGAGCAGAAGCAGTAAACACATTGTATTTTGAAGCACAATGTAGGATTGAAGATCCAGTGTATGGGTGTGTTGGGATTATCTCTCATTTGCATCAACAAATTCACAATACAGAAAGTGAATTAGCCAGAGTCAAAGCTCTCATTGCTTTCCACAAGTACTTCCAAATCCCACACCAAATTCAACCTCATCATCCTCATAATTTGGATATCTTCTCATCATCACACAGCAACGTGGAGCAGCATTTTCAGTTTAATTAG 429 0.3893 MISGRCAACKNQRRRCPSDCIFSPYFPANDPQRFAYVHRIYGGNNVGKMLQQIPSYVRAEAVNTLYFEAQCRIEDPVYGCVGIISHLHQQIHNTESELARVKALIAFHKYFQIPHQIQPHHPHNLDIFSSSHSNVEQHFQFN 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0679 142 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Bisa01g0679 142 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 122 - -
Bisa01g0679 142 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0679 Bisa-ChrBisa01 10547909 10548630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0679 1 106 AS2 family AT3G26660 66.981 1.87e-50 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa01g0679 LOB 8.9e-38 No_clan