Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa01g0667 ATGAGTGTTGACGAGGAAACGGCTCTTTTGTTGGTTTCATTTCGTCAGTCTTTGCCTTATTTCGATTTCGAGGGTAGGAAAATGGAAGGGCATGTAGAGATGGGTCTATTGGCGGAAAATTTCGATCCCAGTTTGATGGGGAAGATTAGGGACGATGGGTATGAGAGCCGTTCTGGGAGTGATAATTTTGAAGGCGTATCAGGGGAGGACGATCAGGATGCTGGTGACGATACACCCCAGAGACCGAAGAAATACCATAGACACACTCCAAACCAAATCCAAGAGCTTGAATCTTTCTTCAAGGAGTGTCCTCATCCTGACGAGAAGCAGAGACTGGAACTCAGCAAGAGGCTTGGCTTGGAGACAAAGCAAGTCAAGTTCTGGTTTCAAAATCGACGAACCCAGATGAAGACCCAACTGGAGCGGCATGAGAATCTAATTCTGAGGCAAGAAAACGACAAGCTCCGAGCAGAGAACAGCATGATGAAGGATGCCATGTCAAACCCAATATGCAACAGCTGCGGAGGCCCAGCCATTCCGGGCCAAATCTCATTCGAAGAGCACCAGCTCCGAATCGAGAATGCTCGACTCAAGGACGAACTGAACCGCATATGTGCCTTGGCCAACAAGTTTCTGGGAAGGCCACTCTCACCCATGGCTCTTCCGAGCTCAAACTCTACTCTAGACCTCGCCATTGGAAGGAGCAACAGCGGCAATAATGTCGGGGCGTCAAGCTTTCCGATGGGGCTCGATTTGGGGATGATGATGGGAAATGATCAAGCACAGGTGGAGAGATCCATGCTCATAGACCTTGCCTTAGCTGCCATGGAGGAACTGATGAAGATGGCTCAGGCAGATACTCCTCTTTGGATGAAGAATTTGAATGGCGAGAAGCAAGTTCTGAACCACGAGGAGTATACGAGGATGTTTCCTCCTTGTCTTGGTCCAAAACCAGCAGGCTATGTCTCTGAAGCTACCCGAGACACTGGGGTAGTCATCGTCAACAGTTTGTCCCTCGTTGAAATATTGATGGACTCGAATCGATGGGCGGAGATGTTTCCATCCATGATTGCTAGAGCTGCGACCCTTGATGTCATATCCAATGGCATGGGAGGAACCAGAAATGGTGCTTTGCAAGTGATGGATGCGGAGATTCAATTGCTGTCGCCACTGGTGCCTGTTCGTCAAGTGAGGTTCCTGCGGTTCTGCAAGCAGCATGCAGAAGGATTATGGAGTGTGGTTGATGTTTCAGTTGAGATAGGACGTGACCCCACCAATCCACACCCTTTCATCTCCTGCAGGAGGCTTCCTTCTGGCTGTGTTCTTCAGGATATGCCCAATGGTTACTCCAAGGTGACATGGGTGGAGCATTGGGAGTACGATGAGAGTGTGGTGCATCAACTGTACCGTCCGATGATAAGTTCGGGGATCGGGTTCGGGGCTCCGAGATGGATCACCACCCTCCTAAGGCAAACCGAATGCCTCGCCATCCTCGTCTCCTCTTCCATTCCTAGTGATGATCACTCCATACCGAGCCAAGGTGGACGGAGAAGCATGGTGAAGCTGGCACAGCGGATGACGGCGAATTTCAGCGCCGGAGTGTCGGGTTCGACAGGGCGGAGGTGGGAGAAGCTGCACGTGGGAAGTCTGGGAGACGACGTGAAGGTGATGACTCGGAAGAACGATGAGGAGCCAGGCGAGCCGCCGGGCGTCGTCCTCAGCGCCGCTACTTCTCTGTGGCTGCCGGTGTCGAGCCAGAGGCTGTTCGACTTCCTCCGCGACGAGCGCTTCCGAAGCGAGTGGGACATATTGTCTAACGGAGGATCCATGCACCAGGTGCTCCAAATTCCCAAAGCACAACACGGGCTCCCCAACTCTGTTTCCCTCCTCCGTGCTCACGGTGTGAACGGGAACGAGACAAACATGTTAATACTGCAAGACACATGGACGGATGGGTCGTGCTCAGTGGTCACGTATGCACCAGTCGACGACCAGTCCTTGAAGGCCGTCATGGGTGGTGGCGATTCTGCTTATGTCCCCCTCTTGCCTTCCGGCTTTGCCATTCTTCCCGATGGATACCGCAGCTACGGTGGCCCGAGCGGCGGCGGCGGCGGCGCCGGAAGCCTACTCACTGTAGGGTTACAGATACTGGTGAGCAGCCTGCCGACGGGGAAGCTGACTGTGGAGTCCGTTGATACCGTCAGCAATCTTATCTCCTGCACCATTCAGAAGATCAAAGCCGCCCTCTCAGTTGGATGA 2259 0.5317 MSVDEETALLLVSFRQSLPYFDFEGRKMEGHVEMGLLAENFDPSLMGKIRDDGYESRSGSDNFEGVSGEDDQDAGDDTPQRPKKYHRHTPNQIQELESFFKECPHPDEKQRLELSKRLGLETKQVKFWFQNRRTQMKTQLERHENLILRQENDKLRAENSMMKDAMSNPICNSCGGPAIPGQISFEEHQLRIENARLKDELNRICALANKFLGRPLSPMALPSSNSTLDLAIGRSNSGNNVGASSFPMGLDLGMMMGNDQAQVERSMLIDLALAAMEELMKMAQADTPLWMKNLNGEKQVLNHEEYTRMFPPCLGPKPAGYVSEATRDTGVVIVNSLSLVEILMDSNRWAEMFPSMIARAATLDVISNGMGGTRNGALQVMDAEIQLLSPLVPVRQVRFLRFCKQHAEGLWSVVDVSVEIGRDPTNPHPFISCRRLPSGCVLQDMPNGYSKVTWVEHWEYDESVVHQLYRPMISSGIGFGAPRWITTLLRQTECLAILVSSSIPSDDHSIPSQGGRRSMVKLAQRMTANFSAGVSGSTGRRWEKLHVGSLGDDVKVMTRKNDEEPGEPPGVVLSAATSLWLPVSSQRLFDFLRDERFRSEWDILSNGGSMHQVLQIPKAQHGLPNSVSLLRAHGVNGNETNMLILQDTWTDGSCSVVTYAPVDDQSLKAVMGGGDSAYVPLLPSGFAILPDGYRSYGGPSGGGGGAGSLLTVGLQILVSSLPTGKLTVESVDTVSNLISCTIQKIKAALSVG 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa01g0667 752 CDD homeodomain 82 139 IPR001356 GO:0003677
Bisa01g0667 752 MobiDBLite consensus disorder prediction 48 88 - -
Bisa01g0667 752 SUPERFAMILY Bet v1-like 264 494 - -
Bisa01g0667 752 ProSitePatterns 'Homeobox' domain signature. 114 137 IPR017970 GO:0000981|GO:0006355
Bisa01g0667 752 SMART START_1 270 494 IPR002913 GO:0008289
Bisa01g0667 752 SUPERFAMILY Bet v1-like 522 746 - -
Bisa01g0667 752 ProSiteProfiles 'Homeobox' domain profile. 79 139 IPR001356 GO:0003677
Bisa01g0667 752 SMART HOX_1 81 143 IPR001356 GO:0003677
Bisa01g0667 752 FunFam Homeobox-leucine zipper protein HDG1 68 155 - -
Bisa01g0667 752 MobiDBLite consensus disorder prediction 74 88 - -
Bisa01g0667 752 CDD START_ArGLABRA2_like 265 493 - -
Bisa01g0667 752 Pfam START domain 271 494 IPR002913 GO:0008289
Bisa01g0667 752 Gene3D - 271 482 IPR023393 -
Bisa01g0667 752 FunFam Homeobox-leucine zipper protein GLABRA 2 270 494 - -
Bisa01g0667 752 SUPERFAMILY Homeodomain-like 65 139 IPR009057 -
Bisa01g0667 752 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 80 749 IPR042160 -
Bisa01g0667 752 Pfam Homeodomain 83 137 IPR001356 GO:0003677
Bisa01g0667 752 Gene3D - 68 154 - -
Bisa01g0667 752 ProSiteProfiles START domain profile. 261 497 IPR002913 GO:0008289
Bisa01g0667 752 Coils Coil 133 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa01g0667 Bisa-ChrBisa01 10260250 10266844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa01g0667 50 749 Homeobox Transcription Factor Family AT3G61150 57.028 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa01g0667 START 1.2e-48 CL0209